MotifSP5.H12CORE.1.P.B
Gene (human)SP5
(GeneCards)
Gene synonyms (human)
Gene (mouse)Sp5
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype1
Quality
B
Motif length25
ConsensusvddRRvddRRvdRRGGGMGGRGvdv
GC content66.2%
Information content (bits; total / per base)16.003 / 0.64
Data sourcesChIP-Seq
Aligned words994

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 4 (25) 0.736 0.871 0.554 0.73 0.81 0.941 3.196 5.228 22.337 76.886
Mouse 1 (6) 0.841 0.845 0.694 0.704 0.869 0.877 4.273 4.46 93.166 102.959
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyThree-zinc finger Kruppel-related {2.3.1} (TFClass)
TF subfamilySp1-like {2.3.1.1} (TFClass)
TFClass IDTFClass: 2.3.1.1.5
HGNCHGNC:14529
MGIMGI:1927715
EntrezGene (human)GeneID:389058
(SSTAR profile)
EntrezGene (mouse)GeneID:64406
(SSTAR profile)
UniProt ID (human)SP5_HUMAN
UniProt ID (mouse)SP5_MOUSE
UniProt AC (human)Q6BEB4
(TFClass)
UniProt AC (mouse)Q9JHX2
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 4 human, 1 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01227.0155.0478.0134.0
02249.096.0457.0192.0
03322.078.0507.087.0
04224.074.0607.089.0
05203.073.0636.082.0
06347.0129.0409.0109.0
07187.0105.0579.0123.0
08221.0103.0558.0112.0
09272.058.0558.0106.0
10144.075.0682.093.0
11278.0155.0457.0104.0
12441.0105.0270.0178.0
13236.091.0576.091.0
14234.027.0532.0201.0
15245.04.0731.014.0
1628.02.0958.06.0
1719.026.0930.019.0
18587.0275.04.0128.0
1958.01.0912.023.0
2016.07.0911.060.0
21473.03.0501.017.0
2251.024.0891.028.0
23247.0533.0120.094.0
24428.0146.0179.0241.0
25216.0138.0525.0115.0
PFM
ACGT
010.2280.1560.4810.135
020.2510.0970.460.193
030.3240.0780.510.088
040.2250.0740.6110.09
050.2040.0730.640.082
060.3490.130.4110.11
070.1880.1060.5820.124
080.2220.1040.5610.113
090.2740.0580.5610.107
100.1450.0750.6860.094
110.280.1560.460.105
120.4440.1060.2720.179
130.2370.0920.5790.092
140.2350.0270.5350.202
150.2460.0040.7350.014
160.0280.0020.9640.006
170.0190.0260.9360.019
180.5910.2770.0040.129
190.0580.0010.9180.023
200.0160.0070.9160.06
210.4760.0030.5040.017
220.0510.0240.8960.028
230.2480.5360.1210.095
240.4310.1470.180.242
250.2170.1390.5280.116
PWM
ACGT
01-0.09-0.4680.651-0.612
020.002-0.940.606-0.256
030.258-1.1440.71-1.037
04-0.103-1.1950.889-1.015
05-0.201-1.2090.936-1.095
060.332-0.6490.496-0.815
07-0.282-0.8520.842-0.696
08-0.116-0.8710.805-0.789
090.09-1.4330.805-0.843
10-0.541-1.1821.005-0.971
110.111-0.4680.606-0.862
120.571-0.8520.082-0.331
13-0.051-0.9930.837-0.993
14-0.06-2.1650.758-0.211
15-0.014-3.7771.074-2.767
16-2.13-4.2071.344-3.478
17-2.491-2.21.315-2.491
180.8560.101-3.777-0.657
19-1.433-4.521.295-2.315
20-2.647-3.3561.294-1.4
210.64-3.9690.698-2.592
22-1.557-2.2751.272-2.13
23-0.0060.759-0.721-0.961
240.541-0.527-0.325-0.03
25-0.139-0.5830.744-0.763
Standard thresholds
P-value Threshold
0.001 2.89286
0.0005 4.02146
0.0001 6.39271