MotifSP5.H12CORE.0.P.B
Gene (human)SP5
(GeneCards)
Gene synonyms (human)
Gene (mouse)Sp5
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
B
Motif length14
ConsensusnvKGGGMGGRGMnv
GC content74.49%
Information content (bits; total / per base)12.98 / 0.927
Data sourcesChIP-Seq
Aligned words997

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 4 (25) 0.821 0.882 0.617 0.722 0.839 0.937 2.933 3.694 34.201 203.796
Mouse 1 (6) 0.882 0.887 0.769 0.779 0.867 0.872 3.208 3.281 148.105 158.444
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyThree-zinc finger Kruppel-related {2.3.1} (TFClass)
TF subfamilySp1-like {2.3.1.1} (TFClass)
TFClass IDTFClass: 2.3.1.1.5
HGNCHGNC:14529
MGIMGI:1927715
EntrezGene (human)GeneID:389058
(SSTAR profile)
EntrezGene (mouse)GeneID:64406
(SSTAR profile)
UniProt ID (human)SP5_HUMAN
UniProt ID (mouse)SP5_MOUSE
UniProt AC (human)Q6BEB4
(TFClass)
UniProt AC (mouse)Q9JHX2
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 4 human, 1 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01366.0161.0287.0183.0
02212.0133.0579.073.0
03148.027.0526.0296.0
04154.02.0839.02.0
053.01.0987.06.0
062.09.0982.04.0
07278.0593.02.0124.0
0821.03.0965.08.0
091.01.0948.047.0
10356.013.0599.029.0
1181.038.0834.044.0
12244.0616.055.082.0
13363.0226.0213.0195.0
14144.0208.0550.095.0
PFM
ACGT
010.3670.1610.2880.184
020.2130.1330.5810.073
030.1480.0270.5280.297
040.1540.0020.8420.002
050.0030.0010.990.006
060.0020.0090.9850.004
070.2790.5950.0020.124
080.0210.0030.9680.008
090.0010.0010.9510.047
100.3570.0130.6010.029
110.0810.0380.8370.044
120.2450.6180.0550.082
130.3640.2270.2140.196
140.1440.2090.5520.095
PWM
ACGT
010.382-0.4330.14-0.306
02-0.161-0.6220.839-1.212
03-0.517-2.1680.7430.171
04-0.477-4.211.209-4.21
05-3.972-4.5221.371-3.481
06-4.21-3.1531.366-3.78
070.1080.863-4.21-0.691
08-2.402-3.9721.349-3.251
09-4.522-4.5221.331-1.639
100.354-2.8360.873-2.1
11-1.11-1.8431.203-1.703
12-0.0210.901-1.487-1.098
130.374-0.097-0.156-0.244
14-0.544-0.180.788-0.953
Standard thresholds
P-value Threshold
0.001 3.67256
0.0005 4.80661
0.0001 7.12611