| Motif | SP3.H12CORE.1.S.B |
| Gene (human) | SP3 (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | Sp3 |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 1 |
| Quality | B |
| Motif | SP3.H12CORE.1.S.B |
| Gene (human) | SP3 (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | Sp3 |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 1 |
| Quality | B |
| Motif length | 11 |
| Consensus | nddGGGCGKdn |
| GC content | 69.6% |
| Information content (bits; total / per base) | 9.781 / 0.889 |
| Data sources | HT-SELEX |
| Aligned words | 8657 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 1 (7) | 0.84 | 0.852 | 0.68 | 0.71 | 0.878 | 0.893 | 2.955 | 3.093 | 31.222 | 43.824 |
| Mouse | 9 (45) | 0.826 | 0.898 | 0.715 | 0.819 | 0.838 | 0.893 | 3.025 | 3.401 | 26.347 | 62.959 |
| HT-SELEX benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
|---|---|---|---|---|---|---|---|
| Non-Methyl HT-SELEX, 2 experiments | median | 0.839 | 0.804 | 0.725 | 0.708 | 0.613 | 0.626 |
| best | 0.924 | 0.895 | 0.793 | 0.78 | 0.641 | 0.667 | |
| TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
| TF class | C2H2 zinc finger factors {2.3} (TFClass) |
| TF family | Three-zinc finger Kruppel-related {2.3.1} (TFClass) |
| TF subfamily | Sp1-like {2.3.1.1} (TFClass) |
| TFClass ID | TFClass: 2.3.1.1.3 |
| HGNC | HGNC:11208 |
| MGI | MGI:1277166 |
| EntrezGene (human) | GeneID:6670 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:20687 (SSTAR profile) |
| UniProt ID (human) | SP3_HUMAN |
| UniProt ID (mouse) | SP3_MOUSE |
| UniProt AC (human) | Q02447 (TFClass) |
| UniProt AC (mouse) | O70494 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 1 human, 9 mouse |
| HT-SELEX | 2 |
| Methyl-HT-SELEX | 0 |
| PCM | SP3.H12CORE.1.S.B.pcm |
| PWM | SP3.H12CORE.1.S.B.pwm |
| PFM | SP3.H12CORE.1.S.B.pfm |
| Alignment | SP3.H12CORE.1.S.B.words.tsv |
| Threshold to P-value map | SP3.H12CORE.1.S.B.thr |
| Motif in other formats | |
| JASPAR format | SP3.H12CORE.1.S.B_jaspar_format.txt |
| MEME format | SP3.H12CORE.1.S.B_meme_format.meme |
| Transfac format | SP3.H12CORE.1.S.B_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 2033.25 | 1754.25 | 2816.25 | 2053.25 |
| 02 | 1862.5 | 1188.5 | 4254.5 | 1351.5 |
| 03 | 1300.0 | 504.0 | 2556.0 | 4297.0 |
| 04 | 1363.0 | 5.0 | 7270.0 | 19.0 |
| 05 | 24.0 | 39.0 | 8476.0 | 118.0 |
| 06 | 1.0 | 0.0 | 8620.0 | 36.0 |
| 07 | 1040.0 | 7098.0 | 0.0 | 519.0 |
| 08 | 129.0 | 8.0 | 8433.0 | 87.0 |
| 09 | 256.0 | 380.0 | 2891.0 | 5130.0 |
| 10 | 1522.25 | 431.25 | 4774.25 | 1929.25 |
| 11 | 1861.75 | 1416.75 | 3365.75 | 2012.75 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.235 | 0.203 | 0.325 | 0.237 |
| 02 | 0.215 | 0.137 | 0.491 | 0.156 |
| 03 | 0.15 | 0.058 | 0.295 | 0.496 |
| 04 | 0.157 | 0.001 | 0.84 | 0.002 |
| 05 | 0.003 | 0.005 | 0.979 | 0.014 |
| 06 | 0.0 | 0.0 | 0.996 | 0.004 |
| 07 | 0.12 | 0.82 | 0.0 | 0.06 |
| 08 | 0.015 | 0.001 | 0.974 | 0.01 |
| 09 | 0.03 | 0.044 | 0.334 | 0.593 |
| 10 | 0.176 | 0.05 | 0.551 | 0.223 |
| 11 | 0.215 | 0.164 | 0.389 | 0.232 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.062 | -0.21 | 0.263 | -0.053 |
| 02 | -0.15 | -0.599 | 0.675 | -0.47 |
| 03 | -0.509 | -1.454 | 0.166 | 0.685 |
| 04 | -0.462 | -5.698 | 1.211 | -4.624 |
| 05 | -4.413 | -3.961 | 1.364 | -2.891 |
| 06 | -6.497 | -6.863 | 1.381 | -4.036 |
| 07 | -0.732 | 1.187 | -6.863 | -1.425 |
| 08 | -2.804 | -5.352 | 1.359 | -3.189 |
| 09 | -2.127 | -1.735 | 0.289 | 0.862 |
| 10 | -0.351 | -1.609 | 0.791 | -0.115 |
| 11 | -0.15 | -0.423 | 0.441 | -0.072 |
| P-value | Threshold |
|---|---|
| 0.001 | 4.97176 |
| 0.0005 | 5.894575 |
| 0.0001 | 7.51802 |