MotifSP2.H12CORE.1.P.B
Gene (human)SP2
(GeneCards)
Gene synonyms (human)KIAA0048
Gene (mouse)Sp2
Gene synonyms (mouse)Kiaa0048
LOGO
LOGO (reverse complement)
Motif subtype1
Quality
B
Motif length21
ConsensusvvnbnnvdRGGMKGRvvnnvv
GC content68.62%
Information content (bits; total / per base)9.513 / 0.453
Data sourcesChIP-Seq
Aligned words864

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 5 (33) 0.693 0.873 0.476 0.729 0.807 0.915 2.942 4.042 20.62 127.252

rSNP benchmarking, ADASTRA odds-ratio -log-Fisher's P Pearson r Kendall tau
# 1.275 0.802 0.046 0.024
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyThree-zinc finger Kruppel-related {2.3.1} (TFClass)
TF subfamilySp1-like {2.3.1.1} (TFClass)
TFClass IDTFClass: 2.3.1.1.2
HGNCHGNC:11207
MGIMGI:1926162
EntrezGene (human)GeneID:6668
(SSTAR profile)
EntrezGene (mouse)GeneID:78912
(SSTAR profile)
UniProt ID (human)SP2_HUMAN
UniProt ID (mouse)SP2_MOUSE
UniProt AC (human)Q02086
(TFClass)
UniProt AC (mouse)Q9D2H6
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 5 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01166.0335.0259.0104.0
02198.0286.0281.099.0
03172.0236.0298.0158.0
04128.0261.0332.0143.0
05160.0296.0269.0139.0
06275.0180.0289.0120.0
07258.0158.0387.061.0
08227.039.0468.0130.0
09283.030.0528.023.0
10109.02.0744.09.0
1125.00.0837.02.0
12171.0635.00.058.0
1372.030.0687.075.0
1444.029.0747.044.0
15217.049.0512.086.0
16215.0128.0446.075.0
17167.0395.0198.0104.0
18149.0303.0216.0196.0
19201.0155.0297.0211.0
20213.0179.0375.097.0
21199.0171.0383.0111.0
PFM
ACGT
010.1920.3880.30.12
020.2290.3310.3250.115
030.1990.2730.3450.183
040.1480.3020.3840.166
050.1850.3430.3110.161
060.3180.2080.3340.139
070.2990.1830.4480.071
080.2630.0450.5420.15
090.3280.0350.6110.027
100.1260.0020.8610.01
110.0290.00.9690.002
120.1980.7350.00.067
130.0830.0350.7950.087
140.0510.0340.8650.051
150.2510.0570.5930.1
160.2490.1480.5160.087
170.1930.4570.2290.12
180.1720.3510.250.227
190.2330.1790.3440.244
200.2470.2070.4340.112
210.230.1980.4430.128
PWM
ACGT
01-0.2610.4360.18-0.723
02-0.0860.2790.261-0.771
03-0.2260.0880.32-0.31
04-0.5180.1880.427-0.408
05-0.2970.3130.218-0.437
060.24-0.1810.289-0.582
070.176-0.310.58-1.245
080.049-1.6770.769-0.503
090.268-1.9270.889-2.177
10-0.676-4.0771.231-3.014
11-2.099-4.8581.349-4.077
12-0.2321.073-4.858-1.294
13-1.083-1.9271.152-1.043
14-1.561-1.9591.235-1.561
150.005-1.4570.859-0.909
16-0.005-0.5180.721-1.043
17-0.2550.6-0.086-0.723
18-0.3680.3360.0-0.096
19-0.071-0.3290.316-0.023
20-0.014-0.1860.548-0.791
21-0.081-0.2320.569-0.658
Standard thresholds
P-value Threshold
0.001 4.84341
0.0005 5.62046
0.0001 7.19881