MotifSOLH2.H12INVIVO.0.S.D
Gene (human)SOHLH2
(GeneCards)
Gene synonyms (human)TEB1
Gene (mouse)Sohlh2
Gene synonyms (mouse)Tohlh2
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length11
ConsensusnCWCGTGCnnn
GC content61.48%
Information content (bits; total / per base)11.261 / 1.024
Data sourcesHT-SELEX
Aligned words9210

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Non-Methyl HT-SELEX, 1 experiments median 0.964 0.947 0.903 0.878 0.81 0.791
best 0.964 0.947 0.903 0.878 0.81 0.791
TF superclassBasic domains {1} (TFClass)
TF classBasic helix-loop-helix factors (bHLH) {1.2} (TFClass)
TF familyPAS {1.2.5} (TFClass)
TF subfamilySOHLH {1.2.5.5} (TFClass)
TFClass IDTFClass: 1.2.5.5.2
HGNCHGNC:26026
MGIMGI:1921684
EntrezGene (human)GeneID:100526761
(SSTAR profile)
GeneID:54937
(SSTAR profile)
EntrezGene (mouse)GeneID:74434
(SSTAR profile)
UniProt ID (human)SOLH2_HUMAN
UniProt ID (mouse)SOLH2_MOUSE
UniProt AC (human)Q9NX45
(TFClass)
UniProt AC (mouse)Q9D489
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 0 human, 0 mouse
HT-SELEX 1
Methyl-HT-SELEX 0
PCM
ACGT
011724.252551.252766.252168.25
02762.57575.5166.5705.5
036996.0714.0642.0858.0
041.09207.02.00.0
050.00.09210.00.0
060.00.00.09210.0
070.02.09206.02.0
08962.07816.0399.033.0
092813.01385.02219.02793.0
102270.52363.51401.53174.5
112053.52344.52317.52494.5
PFM
ACGT
010.1870.2770.30.235
020.0830.8230.0180.077
030.760.0780.070.093
040.01.00.00.0
050.00.01.00.0
060.00.00.01.0
070.00.01.00.0
080.1040.8490.0430.004
090.3050.150.2410.303
100.2470.2570.1520.345
110.2230.2550.2520.271
PWM
ACGT
01-0.2890.1020.183-0.06
02-1.1031.19-2.614-1.181
031.111-1.169-1.275-0.985
04-6.5541.385-6.288-6.918
05-6.918-6.9181.386-6.918
06-6.918-6.918-6.9181.386
07-6.918-6.2881.385-6.288
08-0.8711.221-1.748-4.179
090.2-0.508-0.0370.193
10-0.0140.026-0.4960.321
11-0.1140.0180.0060.08
Standard thresholds
P-value Threshold
0.001 4.331015
0.0005 5.44917
0.0001 7.283875