MotifRELB.H12CORE.0.P.B
Gene (human)RELB
(GeneCards)
Gene synonyms (human)
Gene (mouse)Relb
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
B
Motif length11
ConsensusGGGRvTTTCCh
GC content56.09%
Information content (bits; total / per base)12.401 / 1.127
Data sourcesChIP-Seq
Aligned words849

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 3 (15) 0.875 0.97 0.853 0.949 0.829 0.942 3.535 4.483 61.377 665.301
Mouse 1 (7) 0.794 0.864 0.704 0.803 0.728 0.793 2.376 2.685 39.0 44.081

rSNP benchmarking, ADASTRA odds-ratio -log-Fisher's P Pearson r Kendall tau
# 19.729 3.844 0.425 0.222
TF superclassImmunoglobulin fold {6} (TFClass)
TF classRel homology region (RHR) factors {6.1} (TFClass)
TF familyNFkappaB-related {6.1.1} (TFClass)
TF subfamilyNFkappaB p65-like {6.1.1.2} (TFClass)
TFClass IDTFClass: 6.1.1.2.2
HGNCHGNC:9956
MGIMGI:103289
EntrezGene (human)GeneID:5971
(SSTAR profile)
EntrezGene (mouse)GeneID:19698
(SSTAR profile)
UniProt ID (human)RELB_HUMAN
UniProt ID (mouse)RELB_MOUSE
UniProt AC (human)Q01201
(TFClass)
UniProt AC (mouse)Q04863
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 3 human, 1 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0112.010.0793.034.0
0219.03.0810.017.0
0319.07.0671.0152.0
04397.019.0381.052.0
05224.0320.0242.063.0
0676.03.06.0764.0
072.020.05.0822.0
0825.0150.08.0666.0
094.0788.09.048.0
1045.0726.012.066.0
11429.0131.0124.0165.0
PFM
ACGT
010.0140.0120.9340.04
020.0220.0040.9540.02
030.0220.0080.790.179
040.4680.0220.4490.061
050.2640.3770.2850.074
060.090.0040.0070.9
070.0020.0240.0060.968
080.0290.1770.0090.784
090.0050.9280.0110.057
100.0530.8550.0140.078
110.5050.1540.1460.194
PWM
ACGT
01-2.749-2.9071.312-1.791
02-2.336-3.8211.333-2.438
03-2.336-3.2041.146-0.331
040.622-2.3360.582-1.383
050.0530.4080.13-1.196
06-1.013-3.821-3.3261.275
07-4.061-2.289-3.4661.348
08-2.082-0.344-3.0951.138
09-3.6281.306-2.997-1.46
10-1.5221.224-2.749-1.151
110.7-0.478-0.532-0.25
Standard thresholds
P-value Threshold
0.001 3.970665
0.0005 5.01493
0.0001 7.157415