MotifRBAK.H12INVIVO.0.P.C
Gene (human)RBAK
(GeneCards)
Gene synonyms (human)ZNF769
Gene (mouse)Rbak
Gene synonyms (mouse)Znf769
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
C
Motif length16
ConsensusvRdRASRARhRdbMCh
GC content55.72%
Information content (bits; total / per base)11.046 / 0.69
Data sourcesChIP-Seq
Aligned words504

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (4) 0.829 0.843 0.745 0.753 0.816 0.828 2.98 3.062 120.741 141.921
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZNF12-like {2.3.3.81} (TFClass)
TFClass IDTFClass: 2.3.3.81.2
HGNCHGNC:17680
MGIMGI:1927369
EntrezGene (human)GeneID:57786
(SSTAR profile)
EntrezGene (mouse)GeneID:57782
(SSTAR profile)
UniProt ID (human)RBAK_HUMAN
UniProt ID (mouse)RBAK_MOUSE
UniProt AC (human)Q9NYW8
(TFClass)
UniProt AC (mouse)Q8BQC8
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0198.0128.0217.061.0
0285.041.0357.021.0
03251.036.069.0148.0
04206.04.0290.04.0
05497.00.03.04.0
0612.0233.0249.010.0
07269.07.0225.03.0
08443.019.019.023.0
09291.018.0195.00.0
10106.0244.068.086.0
11283.030.0166.025.0
12133.066.0214.091.0
1345.0189.0216.054.0
1475.0311.047.071.0
1510.0454.020.020.0
1669.0291.067.077.0
PFM
ACGT
010.1940.2540.4310.121
020.1690.0810.7080.042
030.4980.0710.1370.294
040.4090.0080.5750.008
050.9860.00.0060.008
060.0240.4620.4940.02
070.5340.0140.4460.006
080.8790.0380.0380.046
090.5770.0360.3870.0
100.210.4840.1350.171
110.5620.060.3290.05
120.2640.1310.4250.181
130.0890.3750.4290.107
140.1490.6170.0930.141
150.020.9010.040.04
160.1370.5770.1330.153
PWM
ACGT
01-0.2480.0160.538-0.712
02-0.388-1.0981.034-1.733
030.683-1.223-0.5920.159
040.487-3.1340.827-3.134
051.363-4.407-3.332-3.134
06-2.2420.6090.675-2.401
070.752-2.7020.574-3.332
081.249-1.825-1.825-1.648
090.83-1.8750.432-4.407
10-0.1710.655-0.606-0.376
110.802-1.3970.273-1.569
120.053-0.6360.525-0.321
13-1.0080.4010.534-0.831
14-0.5110.896-0.966-0.564
15-2.4011.273-1.778-1.778
16-0.5920.83-0.621-0.485
Standard thresholds
P-value Threshold
0.001 4.54006
0.0005 5.43216
0.0001 7.25246