MotifPRD15.H12INVIVO.0.P.B
Gene (human)PRDM15
(GeneCards)
Gene synonyms (human)C21orf83, ZNF298
Gene (mouse)Prdm15
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
B
Motif length18
ConsensusvbAARRYSYGGvvndRvd
GC content54.92%
Information content (bits; total / per base)11.747 / 0.653
Data sourcesChIP-Seq
Aligned words995

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Mouse 8 (50) 0.848 0.899 0.747 0.823 0.854 0.901 3.45 4.143 158.932 414.018
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMultiple dispersed zinc fingers {2.3.4} (TFClass)
TF subfamilyUnclassified {2.3.4.0} (TFClass)
TFClass IDTFClass: 2.3.4.0.32
HGNCHGNC:13999
MGIMGI:1930121
EntrezGene (human)GeneID:63977
(SSTAR profile)
EntrezGene (mouse)GeneID:114604
(SSTAR profile)
UniProt ID (human)PRD15_HUMAN
UniProt ID (mouse)PRD15_MOUSE
UniProt AC (human)P57071
(TFClass)
UniProt AC (mouse)E9Q8T2
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 0 human, 8 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01210.0187.0460.0138.0
02114.0284.0444.0153.0
03916.021.053.05.0
04940.04.049.02.0
05714.023.0228.030.0
06630.0121.0162.082.0
0781.0642.0117.0155.0
08144.0669.0161.021.0
09134.0369.08.0484.0
106.02.0986.01.0
1143.07.0935.010.0
12546.0207.0147.095.0
13279.0213.0394.0109.0
14191.0349.0155.0300.0
15166.0155.0485.0189.0
16130.0118.0648.099.0
17408.0114.0397.076.0
18268.0144.0378.0205.0
PFM
ACGT
010.2110.1880.4620.139
020.1150.2850.4460.154
030.9210.0210.0530.005
040.9450.0040.0490.002
050.7180.0230.2290.03
060.6330.1220.1630.082
070.0810.6450.1180.156
080.1450.6720.1620.021
090.1350.3710.0080.486
100.0060.0020.9910.001
110.0430.0070.940.01
120.5490.2080.1480.095
130.280.2140.3960.11
140.1920.3510.1560.302
150.1670.1560.4870.19
160.1310.1190.6510.099
170.410.1150.3990.076
180.2690.1450.380.206
PWM
ACGT
01-0.168-0.2830.612-0.584
02-0.7720.1320.576-0.482
031.299-2.4-1.521-3.617
041.324-3.778-1.597-4.208
051.05-2.316-0.086-2.066
060.925-0.713-0.425-1.096
07-1.1080.944-0.747-0.469
08-0.5420.985-0.431-2.4
09-0.6130.392-3.2490.662
10-3.479-4.2081.372-4.521
11-1.723-3.3571.319-3.062
120.782-0.182-0.521-0.951
130.114-0.1540.457-0.816
14-0.2620.337-0.4690.186
15-0.401-0.4690.664-0.273
16-0.643-0.7380.953-0.911
170.492-0.7720.465-1.17
180.074-0.5420.416-0.192
Standard thresholds
P-value Threshold
0.001 4.31086
0.0005 5.26916
0.0001 7.20801