MotifPO2F3.H12INVIVO.1.S.C
Gene (human)POU2F3
(GeneCards)
Gene synonyms (human)OTF11, PLA1
Gene (mouse)Pou2f3
Gene synonyms (mouse)Epoc1, Oct11, Otf-11, Otf11
LOGO
LOGO (reverse complement)
Motif subtype1
Quality
C
Motif length19
ConsensushdhWTWWGCTAATTWGbnn
GC content32.99%
Information content (bits; total / per base)18.37 / 0.967
Data sourcesHT-SELEX
Aligned words574

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Mouse 1 (6) 0.787 0.801 0.68 0.694 0.74 0.754 2.442 2.489 100.959 116.004

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Non-Methyl HT-SELEX, 2 experiments median 0.99 0.985 0.968 0.957 0.922 0.903
best 0.992 0.988 0.971 0.961 0.924 0.907
TF superclassHelix-turn-helix domains {3} (TFClass)
TF classHomeo domain factors {3.1} (TFClass)
TF familyPOU {3.1.10} (TFClass)
TF subfamilyPOU2 {3.1.10.2} (TFClass)
TFClass IDTFClass: 3.1.10.2.3
HGNCHGNC:19864
MGIMGI:102565
EntrezGene (human)GeneID:25833
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)PO2F3_HUMAN
UniProt ID (mouse)PO2F3_MOUSE
UniProt AC (human)Q9UKI9
(TFClass)
UniProt AC (mouse)P31362
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 0 human, 1 mouse
HT-SELEX 2
Methyl-HT-SELEX 0
PCM
ACGT
01167.75102.7575.75227.75
02256.7528.75209.7578.75
03295.0123.077.079.0
04282.012.072.0208.0
0520.036.018.0500.0
06457.015.041.061.0
0761.027.042.0444.0
0826.047.0491.010.0
092.0569.02.01.0
10255.00.00.0319.0
11565.01.01.07.0
12574.00.00.00.0
130.00.00.0574.0
144.09.024.0537.0
15372.015.00.0187.0
1638.031.0485.020.0
1746.0313.0109.0106.0
18115.75205.75103.75148.75
19119.5201.5109.5143.5
PFM
ACGT
010.2920.1790.1320.397
020.4470.050.3650.137
030.5140.2140.1340.138
040.4910.0210.1250.362
050.0350.0630.0310.871
060.7960.0260.0710.106
070.1060.0470.0730.774
080.0450.0820.8550.017
090.0030.9910.0030.002
100.4440.00.00.556
110.9840.0020.0020.012
121.00.00.00.0
130.00.00.01.0
140.0070.0160.0420.936
150.6480.0260.00.326
160.0660.0540.8450.035
170.080.5450.190.185
180.2020.3580.1810.259
190.2080.3510.1910.25
PWM
ACGT
010.155-0.33-0.6290.458
020.577-1.5650.376-0.591
030.715-0.152-0.613-0.588
040.67-2.368-0.6790.368
05-1.905-1.351-2.0021.24
061.151-2.169-1.226-0.841
07-0.841-1.624-1.2031.122
08-1.66-1.0941.222-2.527
09-3.71.369-3.7-4.026
100.57-4.515-4.5150.793
111.362-4.026-4.026-2.827
121.378-4.515-4.515-4.515
13-4.515-4.515-4.5151.378
14-3.257-2.618-1.7351.312
150.946-2.169-4.5150.262
16-1.299-1.4931.21-1.905
17-1.1150.774-0.272-0.299
18-0.2120.357-0.320.036
19-0.1810.336-0.2670.0
Standard thresholds
P-value Threshold
0.001 1.12216
0.0005 2.52651
0.0001 5.46611