MotifPO2F3.H12INVITRO.0.PS.A
Gene (human)POU2F3
(GeneCards)
Gene synonyms (human)OTF11, PLA1
Gene (mouse)Pou2f3
Gene synonyms (mouse)Epoc1, Oct11, Otf-11, Otf11
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
A
Motif length13
ConsensusdbGCAAATTWvnn
GC content35.74%
Information content (bits; total / per base)13.392 / 1.03
Data sourcesChIP-Seq + HT-SELEX
Aligned words7441

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Mouse 1 (6) 0.811 0.83 0.713 0.735 0.74 0.762 2.34 2.452 109.297 128.921

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Non-Methyl HT-SELEX, 2 experiments median 0.998 0.996 0.995 0.993 0.987 0.982
best 0.998 0.997 0.996 0.994 0.988 0.983
TF superclassHelix-turn-helix domains {3} (TFClass)
TF classHomeo domain factors {3.1} (TFClass)
TF familyPOU {3.1.10} (TFClass)
TF subfamilyPOU2 {3.1.10.2} (TFClass)
TFClass IDTFClass: 3.1.10.2.3
HGNCHGNC:19864
MGIMGI:102565
EntrezGene (human)GeneID:25833
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)PO2F3_HUMAN
UniProt ID (mouse)PO2F3_MOUSE
UniProt AC (human)Q9UKI9
(TFClass)
UniProt AC (mouse)P31362
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 0 human, 1 mouse
HT-SELEX 2
Methyl-HT-SELEX 0
PCM
ACGT
014030.251094.251175.251141.25
021094.51153.51180.54012.5
0339.035.07291.076.0
0421.07178.059.0183.0
054542.01.01.02897.0
067330.02.028.081.0
077441.00.00.00.0
080.02.06.07433.0
0926.0336.0736.06343.0
105056.0752.092.01541.0
111384.01380.03912.0765.0
12871.752191.752177.752199.75
131317.52303.51484.52335.5
PFM
ACGT
010.5420.1470.1580.153
020.1470.1550.1590.539
030.0050.0050.980.01
040.0030.9650.0080.025
050.610.00.00.389
060.9850.00.0040.011
071.00.00.00.0
080.00.00.0010.999
090.0030.0450.0990.852
100.6790.1010.0120.207
110.1860.1850.5260.103
120.1170.2950.2930.296
130.1770.310.20.314
PWM
ACGT
010.772-0.53-0.459-0.488
02-0.53-0.477-0.4540.768
03-3.811-3.9131.365-3.17
04-4.3841.349-3.415-2.308
050.892-6.358-6.3580.443
061.37-6.088-4.121-3.108
071.385-6.728-6.728-6.728
08-6.728-6.088-5.4221.384
09-4.189-1.706-0.9251.226
100.999-0.904-2.984-0.188
11-0.295-0.2980.743-0.887
12-0.7570.1640.1570.167
13-0.3440.213-0.2250.227
Standard thresholds
P-value Threshold
0.001 2.77991
0.0005 4.16071
0.0001 7.103695