MotifONEC3.H12INVIVO.2.M.D
Gene (human)ONECUT3
(GeneCards)
Gene synonyms (human)
Gene (mouse)Onecut3
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype2
Quality
D
Motif length13
ConsensusnbTATTGATTRdb
GC content27.86%
Information content (bits; total / per base)15.839 / 1.218
Data sourcesMethyl-HT-SELEX
Aligned words782

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Overall, 4 experiments median 0.966 0.951 0.886 0.873 0.786 0.79
best 0.996 0.991 0.995 0.99 0.991 0.985
Methyl HT-SELEX, 1 experiments median 0.996 0.991 0.995 0.99 0.991 0.985
best 0.996 0.991 0.995 0.99 0.991 0.985
Non-Methyl HT-SELEX, 3 experiments median 0.956 0.944 0.816 0.813 0.65 0.685
best 0.976 0.958 0.956 0.934 0.923 0.894
TF superclassHelix-turn-helix domains {3} (TFClass)
TF classHomeo domain factors {3.1} (TFClass)
TF familyHD-CUT {3.1.9} (TFClass)
TF subfamilyONECUT {3.1.9.1} (TFClass)
TFClass IDTFClass: 3.1.9.1.3
HGNCHGNC:13399
MGIMGI:1891409
EntrezGene (human)GeneID:390874
(SSTAR profile)
EntrezGene (mouse)GeneID:246086
(SSTAR profile)
UniProt ID (human)ONEC3_HUMAN
UniProt ID (mouse)ONEC3_MOUSE
UniProt AC (human)O60422
(TFClass)
UniProt AC (mouse)Q8K557
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 0 human, 0 mouse
HT-SELEX 3
Methyl-HT-SELEX 1
PCM
ACGT
01241.25162.25233.25145.25
02106.25158.25270.25247.25
0324.019.031.0708.0
04782.00.00.00.0
050.00.00.0782.0
060.00.00.0782.0
070.00.0782.00.0
08781.01.00.00.0
090.01.00.0781.0
100.0162.00.0620.0
11186.025.0468.0103.0
12446.594.5124.5116.5
1396.75182.75117.75384.75
PFM
ACGT
010.3090.2070.2980.186
020.1360.2020.3460.316
030.0310.0240.040.905
041.00.00.00.0
050.00.00.01.0
060.00.00.01.0
070.00.01.00.0
080.9990.0010.00.0
090.00.0010.00.999
100.00.2070.00.793
110.2380.0320.5980.132
120.5710.1210.1590.149
130.1240.2340.1510.492
PWM
ACGT
010.209-0.1850.175-0.294
02-0.603-0.2090.3210.233
03-2.039-2.256-1.7981.281
041.38-4.774-4.774-4.774
05-4.774-4.774-4.7741.38
06-4.774-4.774-4.7741.38
07-4.774-4.7741.38-4.774
081.379-4.304-4.774-4.774
09-4.774-4.304-4.7741.379
10-4.774-0.186-4.7741.148
11-0.049-2.0010.868-0.633
120.821-0.718-0.446-0.512
13-0.695-0.067-0.5010.673
Standard thresholds
P-value Threshold
0.001 1.13901
0.0005 2.758875
0.0001 5.78334