MotifONEC3.H12INVITRO.0.S.B
Gene (human)ONECUT3
(GeneCards)
Gene synonyms (human)
Gene (mouse)Onecut3
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
B
Motif length14
ConsensusnbTATTGATTWdbn
GC content25.52%
Information content (bits; total / per base)14.906 / 1.065
Data sourcesHT-SELEX
Aligned words8841

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Overall, 4 experiments median 0.986 0.974 0.897 0.899 0.796 0.816
best 0.993 0.99 0.99 0.981 0.987 0.977
Methyl HT-SELEX, 1 experiments median 0.991 0.983 0.99 0.981 0.987 0.977
best 0.991 0.983 0.99 0.981 0.987 0.977
Non-Methyl HT-SELEX, 3 experiments median 0.981 0.965 0.815 0.838 0.629 0.689
best 0.993 0.99 0.979 0.961 0.962 0.943
TF superclassHelix-turn-helix domains {3} (TFClass)
TF classHomeo domain factors {3.1} (TFClass)
TF familyHD-CUT {3.1.9} (TFClass)
TF subfamilyONECUT {3.1.9.1} (TFClass)
TFClass IDTFClass: 3.1.9.1.3
HGNCHGNC:13399
MGIMGI:1891409
EntrezGene (human)GeneID:390874
(SSTAR profile)
EntrezGene (mouse)GeneID:246086
(SSTAR profile)
UniProt ID (human)ONEC3_HUMAN
UniProt ID (mouse)ONEC3_MOUSE
UniProt AC (human)O60422
(TFClass)
UniProt AC (mouse)Q8K557
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 0 human, 0 mouse
HT-SELEX 3
Methyl-HT-SELEX 1
PCM
ACGT
012441.01678.01795.02927.0
021327.251380.251606.254527.25
03781.0413.0424.07223.0
048742.035.029.035.0
056.038.05.08792.0
060.04145.00.04696.0
071.00.08840.00.0
088834.00.05.02.0
091.029.019.08792.0
1091.0250.039.08461.0
112243.0190.0887.05521.0
121701.01018.01402.04720.0
131297.751849.751453.754239.75
141595.01852.02199.03195.0
PFM
ACGT
010.2760.190.2030.331
020.150.1560.1820.512
030.0880.0470.0480.817
040.9890.0040.0030.004
050.0010.0040.0010.994
060.00.4690.00.531
070.00.01.00.0
080.9990.00.0010.0
090.00.0030.0020.994
100.010.0280.0040.957
110.2540.0210.10.624
120.1920.1150.1590.534
130.1470.2090.1640.48
140.180.2090.2490.361
PWM
ACGT
010.099-0.275-0.2080.281
02-0.509-0.47-0.3190.716
03-1.038-1.673-1.6471.183
041.374-4.084-4.259-4.084
05-5.589-4.006-5.7181.38
06-6.8810.628-6.8810.753
07-6.517-6.8811.385-6.881
081.385-6.881-5.718-6.25
09-6.517-4.259-4.6451.38
10-3.166-2.171-3.9821.342
110.015-2.443-0.9110.915
12-0.262-0.774-0.4550.758
13-0.532-0.178-0.4180.651
14-0.326-0.177-0.0050.368
Standard thresholds
P-value Threshold
0.001 1.37716
0.0005 2.91476
0.0001 6.279075