MotifOLIG1.H12INVITRO.0.S.B
Gene (human)OLIG1
(GeneCards)
Gene synonyms (human)BHLHB6, BHLHE21
Gene (mouse)Olig1
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
B
Motif length16
ConsensusnnnnvAMCATATGKYn
GC content37.66%
Information content (bits; total / per base)16.199 / 1.012
Data sourcesHT-SELEX
Aligned words2239

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Non-Methyl HT-SELEX, 2 experiments median 0.954 0.952 0.837 0.844 0.693 0.719
best 0.999 0.999 0.941 0.944 0.759 0.79
TF superclassBasic domains {1} (TFClass)
TF classBasic helix-loop-helix factors (bHLH) {1.2} (TFClass)
TF familyTal-related {1.2.3} (TFClass)
TF subfamilyNeurogenin-ATO {1.2.3.4} (TFClass)
TFClass IDTFClass: 1.2.3.4.13
HGNCHGNC:16983
MGIMGI:1355334
EntrezGene (human)GeneID:116448
(SSTAR profile)
EntrezGene (mouse)GeneID:50914
(SSTAR profile)
UniProt ID (human)OLIG1_HUMAN
UniProt ID (mouse)OLIG1_MOUSE
UniProt AC (human)Q8TAK6
(TFClass)
UniProt AC (mouse)Q9JKN5
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 0 human, 0 mouse
HT-SELEX 2
Methyl-HT-SELEX 0
PCM
ACGT
01708.5437.5564.5528.5
02737.75420.75655.75424.75
03843.0412.0593.0391.0
04817.0394.0517.0511.0
051132.0341.0508.0258.0
062086.011.0128.014.0
071258.0877.0104.00.0
080.02239.00.00.0
092239.00.00.00.0
100.00.00.02239.0
112239.00.00.00.0
120.00.00.02239.0
130.00.02239.00.0
143.0259.01154.0823.0
1588.25590.2569.251491.25
16613.0503.0476.0647.0
PFM
ACGT
010.3160.1950.2520.236
020.3290.1880.2930.19
030.3770.1840.2650.175
040.3650.1760.2310.228
050.5060.1520.2270.115
060.9320.0050.0570.006
070.5620.3920.0460.0
080.01.00.00.0
091.00.00.00.0
100.00.00.01.0
111.00.00.00.0
120.00.00.01.0
130.00.01.00.0
140.0010.1160.5150.368
150.0390.2640.0310.666
160.2740.2250.2130.289
PWM
ACGT
010.235-0.2450.008-0.057
020.275-0.2840.158-0.275
030.408-0.3050.058-0.357
040.377-0.35-0.079-0.091
050.703-0.493-0.097-0.771
061.313-3.771-1.464-3.563
070.8080.448-1.668-5.674
08-5.6741.384-5.674-5.674
091.384-5.674-5.674-5.674
10-5.674-5.674-5.6741.384
111.384-5.674-5.674-5.674
12-5.674-5.674-5.6741.384
13-5.674-5.6741.384-5.674
14-4.736-0.7670.7220.384
15-1.8290.053-2.0660.978
160.091-0.107-0.1610.144
Standard thresholds
P-value Threshold
0.001 -0.41324
0.0005 1.57476
0.0001 4.93891