MotifNFYB.H12INVIVO.0.P.B
Gene (human)NFYB
(GeneCards)
Gene synonyms (human)HAP3
Gene (mouse)Nfyb
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
B
Motif length14
ConsensusbbRRCCAATSRvvd
GC content47.72%
Information content (bits; total / per base)13.586 / 0.97
Data sourcesChIP-Seq
Aligned words1001

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 2 (12) 0.939 0.981 0.885 0.945 0.929 0.976 4.668 5.061 220.925 278.398
Mouse 1 (7) 0.974 0.982 0.933 0.942 0.973 0.982 5.292 5.469 240.081 258.553
TF superclassOther all-alpha-helical DNA-binding domains {4} (TFClass)
TF classHeteromeric CCAAT-binding factors {4.2} (TFClass)
TF familyHeteromeric CCAAT-binding {4.2.1} (TFClass)
TF subfamily {4.2.1.0} (TFClass)
TFClass IDTFClass: 4.2.1.0.2
HGNCHGNC:7805
MGIMGI:97317
EntrezGene (human)GeneID:4801
(SSTAR profile)
EntrezGene (mouse)GeneID:18045
(SSTAR profile)
UniProt ID (human)NFYB_HUMAN
UniProt ID (mouse)NFYB_MOUSE
UniProt AC (human)P25208
(TFClass)
UniProt AC (mouse)P63139
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 2 human, 1 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01141.0310.0181.0369.0
0287.0376.0161.0377.0
03563.066.0352.020.0
04355.024.0522.0100.0
051.0995.02.03.0
061.0994.02.04.0
07992.00.00.09.0
08984.08.06.03.0
091.05.00.0995.0
10139.0579.0241.042.0
11685.029.0278.09.0
12189.0181.0563.068.0
13571.0227.0129.074.0
14418.033.0424.0126.0
PFM
ACGT
010.1410.310.1810.369
020.0870.3760.1610.377
030.5620.0660.3520.02
040.3550.0240.5210.1
050.0010.9940.0020.003
060.0010.9930.0020.004
070.9910.00.00.009
080.9830.0080.0060.003
090.0010.0050.00.994
100.1390.5780.2410.042
110.6840.0290.2780.009
120.1890.1810.5620.068
130.570.2270.1290.074
140.4180.0330.4240.126
PWM
ACGT
01-0.5680.213-0.3210.386
02-1.0440.405-0.4370.407
030.807-1.3140.339-2.451
040.348-2.2820.732-0.907
05-4.5261.375-4.214-3.976
06-4.5261.374-4.214-3.784
071.372-4.983-4.983-3.157
081.364-3.254-3.485-3.976
09-4.526-3.623-4.9831.375
10-0.5830.835-0.037-1.751
111.003-2.1040.104-3.157
12-0.278-0.3210.807-1.285
130.821-0.097-0.656-1.202
140.51-1.9820.524-0.679
Standard thresholds
P-value Threshold
0.001 3.10971
0.0005 4.33776
0.0001 7.04696