MotifNFAC4.H12CORE.0.P.C
Gene (human)NFATC4
(GeneCards)
Gene synonyms (human)NFAT3
Gene (mouse)Nfatc4
Gene synonyms (mouse)Nfat3
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
C
Motif length10
ConsensusdGGAAARhdW
GC content35.69%
Information content (bits; total / per base)11.136 / 1.114
Data sourcesChIP-Seq
Aligned words19

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (4) 0.529 0.532 0.347 0.348 0.562 0.577 1.172 1.201 0.0 0

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Overall, 4 experiments median 0.945 0.901 0.936 0.892 0.884 0.849
best 0.973 0.949 0.966 0.941 0.952 0.924
Methyl HT-SELEX, 2 experiments median 0.945 0.901 0.936 0.892 0.884 0.849
best 0.963 0.929 0.957 0.924 0.932 0.899
Non-Methyl HT-SELEX, 2 experiments median 0.927 0.881 0.914 0.868 0.855 0.824
best 0.973 0.949 0.966 0.941 0.952 0.924
TF superclassImmunoglobulin fold {6} (TFClass)
TF classRel homology region (RHR) factors {6.1} (TFClass)
TF familyNFAT-related {6.1.3} (TFClass)
TF subfamily {6.1.3.0} (TFClass)
TFClass IDTFClass: 6.1.3.0.4
HGNCHGNC:7778
MGIMGI:1920431
EntrezGene (human)GeneID:4776
(SSTAR profile)
EntrezGene (mouse)GeneID:73181
(SSTAR profile)
UniProt ID (human)NFAC4_HUMAN
UniProt ID (mouse)NFAC4_MOUSE
UniProt AC (human)Q14934
(TFClass)
UniProt AC (mouse)Q8K120
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 2
Methyl-HT-SELEX 2
PCM
ACGT
017.8932.7233.9334.483
020.00.018.040.99
030.00.019.030.0
0419.030.00.00.0
0519.030.00.00.0
0619.030.00.00.0
0711.992.973.080.99
083.964.952.098.03
093.082.974.078.91
105.940.04.079.02
PFM
ACGT
010.4150.1430.2070.236
020.00.00.9480.052
030.00.01.00.0
041.00.00.00.0
051.00.00.00.0
061.00.00.00.0
070.630.1560.1620.052
080.2080.260.110.422
090.1620.1560.2140.468
100.3120.00.2140.474
PWM
ACGT
010.451-0.463-0.163-0.051
02-2.009-2.0091.229-1.158
03-2.009-2.0091.28-2.009
041.28-2.009-2.009-2.009
051.28-2.009-2.009-2.009
061.28-2.009-2.009-2.009
070.84-0.394-0.364-1.158
08-0.1570.034-0.6650.467
09-0.364-0.394-0.1340.563
100.195-2.009-0.1340.574
Standard thresholds
P-value Threshold
0.001 4.89599
0.0005 5.700815
0.0001 7.234575