MotifNF2L1.H12INVITRO.0.P.D
Gene (human)NFE2L1
(GeneCards)
Gene synonyms (human)HBZ17, NRF1, TCF11
Gene (mouse)Nfe2l1
Gene synonyms (mouse)Nrf1
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length16
ConsensusddWWhTGCTGAGTCAT
GC content40.65%
Information content (bits; total / per base)19.776 / 1.236
Data sourcesChIP-Seq
Aligned words929

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 3 (21) 0.711 0.978 0.672 0.973 0.775 0.977 4.244 8.812 36.77 851.097
Mouse 1 (7) 0.927 0.937 0.911 0.922 0.945 0.955 5.486 5.567 522.721 595.252
TF superclassBasic domains {1} (TFClass)
TF classBasic leucine zipper factors (bZIP) {1.1} (TFClass)
TF familyJun-related {1.1.1} (TFClass)
TF subfamilyNFE2 {1.1.1.2} (TFClass)
TFClass IDTFClass: 1.1.1.2.2
HGNCHGNC:7781
MGIMGI:99421
EntrezGene (human)GeneID:4779
(SSTAR profile)
EntrezGene (mouse)GeneID:18023
(SSTAR profile)
UniProt ID (human)NF2L1_HUMAN
UniProt ID (mouse)NF2L1_MOUSE
UniProt AC (human)Q14494
(TFClass)
UniProt AC (mouse)Q61985
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 3 human, 1 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01421.095.0269.0144.0
02458.047.0245.0179.0
03589.033.059.0248.0
04499.095.041.0294.0
05195.0204.0138.0392.0
0653.041.011.0824.0
070.04.0918.07.0
0837.0880.01.011.0
0928.021.01.0879.0
1023.016.0844.046.0
11862.08.00.059.0
129.090.0827.03.0
132.00.02.0925.0
140.0926.03.00.0
15924.02.01.02.0
161.0219.01.0708.0
PFM
ACGT
010.4530.1020.290.155
020.4930.0510.2640.193
030.6340.0360.0640.267
040.5370.1020.0440.316
050.210.220.1490.422
060.0570.0440.0120.887
070.00.0040.9880.008
080.040.9470.0010.012
090.030.0230.0010.946
100.0250.0170.9090.05
110.9280.0090.00.064
120.010.0970.890.003
130.0020.00.0020.996
140.00.9970.0030.0
150.9950.0020.0010.002
160.0010.2360.0010.762
PWM
ACGT
010.592-0.8830.146-0.474
020.675-1.5690.053-0.258
030.926-1.908-1.3490.065
040.761-0.883-1.7010.234
05-0.173-0.129-0.5160.52
06-1.453-1.701-2.9131.261
07-4.92-3.7131.369-3.291
08-1.7991.327-4.459-2.913
09-2.064-2.332-4.4591.326
10-2.248-2.5811.285-1.59
111.306-3.182-4.92-1.349
12-3.084-0.9371.265-3.906
13-4.145-4.92-4.1451.376
14-4.921.378-3.906-4.92
151.375-4.145-4.459-4.145
16-4.459-0.058-4.4591.11
Standard thresholds
P-value Threshold
0.001 -0.35914
0.0005 1.19286
0.0001 4.46221