| Motif | MZF1.H12INVITRO.0.P.D |
| Gene (human) | MZF1 (GeneCards) |
| Gene synonyms (human) | MZF, ZNF42, ZSCAN6 |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | D |
| Motif | MZF1.H12INVITRO.0.P.D |
| Gene (human) | MZF1 (GeneCards) |
| Gene synonyms (human) | MZF, ZNF42, ZSCAN6 |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | D |
| Motif length | 12 |
| Consensus | dnWGGGGAKYnn |
| GC content | 54.43% |
| Information content (bits; total / per base) | 10.968 / 0.914 |
| Data sources | ChIP-Seq |
| Aligned words | 1000 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 2 (11) | 0.861 | 0.9 | 0.774 | 0.813 | 0.791 | 0.831 | 2.397 | 2.609 | 165.092 | 258.553 |
| TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
| TF class | C2H2 zinc finger factors {2.3} (TFClass) |
| TF family | More than 3 adjacent zinc fingers {2.3.3} (TFClass) |
| TF subfamily | Unclassified {2.3.3.0} (TFClass) |
| TFClass ID | TFClass: 2.3.3.0.152 |
| HGNC | HGNC:13108 |
| MGI | |
| EntrezGene (human) | GeneID:7593 (SSTAR profile) |
| EntrezGene (mouse) | |
| UniProt ID (human) | MZF1_HUMAN |
| UniProt ID (mouse) | |
| UniProt AC (human) | P28698 (TFClass) |
| UniProt AC (mouse) | |
| GRECO-DB-TF | yes |
| ChIP-Seq | 2 human, 0 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 0 |
| PCM | MZF1.H12INVITRO.0.P.D.pcm |
| PWM | MZF1.H12INVITRO.0.P.D.pwm |
| PFM | MZF1.H12INVITRO.0.P.D.pfm |
| Alignment | MZF1.H12INVITRO.0.P.D.words.tsv |
| Threshold to P-value map | MZF1.H12INVITRO.0.P.D.thr |
| Motif in other formats | |
| JASPAR format | MZF1.H12INVITRO.0.P.D_jaspar_format.txt |
| MEME format | MZF1.H12INVITRO.0.P.D_meme_format.meme |
| Transfac format | MZF1.H12INVITRO.0.P.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 407.0 | 129.0 | 292.0 | 172.0 |
| 02 | 327.0 | 152.0 | 281.0 | 240.0 |
| 03 | 325.0 | 21.0 | 157.0 | 497.0 |
| 04 | 90.0 | 0.0 | 903.0 | 7.0 |
| 05 | 7.0 | 1.0 | 988.0 | 4.0 |
| 06 | 6.0 | 1.0 | 992.0 | 1.0 |
| 07 | 1.0 | 2.0 | 996.0 | 1.0 |
| 08 | 988.0 | 5.0 | 4.0 | 3.0 |
| 09 | 121.0 | 69.0 | 155.0 | 655.0 |
| 10 | 14.0 | 234.0 | 182.0 | 570.0 |
| 11 | 222.0 | 158.0 | 270.0 | 350.0 |
| 12 | 231.0 | 166.0 | 373.0 | 230.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.407 | 0.129 | 0.292 | 0.172 |
| 02 | 0.327 | 0.152 | 0.281 | 0.24 |
| 03 | 0.325 | 0.021 | 0.157 | 0.497 |
| 04 | 0.09 | 0.0 | 0.903 | 0.007 |
| 05 | 0.007 | 0.001 | 0.988 | 0.004 |
| 06 | 0.006 | 0.001 | 0.992 | 0.001 |
| 07 | 0.001 | 0.002 | 0.996 | 0.001 |
| 08 | 0.988 | 0.005 | 0.004 | 0.003 |
| 09 | 0.121 | 0.069 | 0.155 | 0.655 |
| 10 | 0.014 | 0.234 | 0.182 | 0.57 |
| 11 | 0.222 | 0.158 | 0.27 | 0.35 |
| 12 | 0.231 | 0.166 | 0.373 | 0.23 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.485 | -0.655 | 0.154 | -0.371 |
| 02 | 0.267 | -0.493 | 0.116 | -0.041 |
| 03 | 0.261 | -2.405 | -0.461 | 0.684 |
| 04 | -1.01 | -4.982 | 1.279 | -3.362 |
| 05 | -3.362 | -4.525 | 1.369 | -3.783 |
| 06 | -3.484 | -4.525 | 1.373 | -4.525 |
| 07 | -4.525 | -4.213 | 1.377 | -4.525 |
| 08 | 1.369 | -3.622 | -3.783 | -3.975 |
| 09 | -0.718 | -1.27 | -0.474 | 0.959 |
| 10 | -2.773 | -0.066 | -0.315 | 0.82 |
| 11 | -0.118 | -0.455 | 0.076 | 0.335 |
| 12 | -0.078 | -0.406 | 0.398 | -0.083 |
| P-value | Threshold |
|---|---|
| 0.001 | 4.24058 |
| 0.0005 | 5.64769 |
| 0.0001 | 7.66944 |