MotifMZF1.H12INVITRO.0.P.D
Gene (human)MZF1
(GeneCards)
Gene synonyms (human)MZF, ZNF42, ZSCAN6
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length12
ConsensusdnWGGGGAKYnn
GC content54.43%
Information content (bits; total / per base)10.968 / 0.914
Data sourcesChIP-Seq
Aligned words1000

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 2 (11) 0.861 0.9 0.774 0.813 0.791 0.831 2.397 2.609 165.092 258.553
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyUnclassified {2.3.3.0} (TFClass)
TFClass IDTFClass: 2.3.3.0.152
HGNCHGNC:13108
MGI
EntrezGene (human)GeneID:7593
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)MZF1_HUMAN
UniProt ID (mouse)
UniProt AC (human)P28698
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 2 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01407.0129.0292.0172.0
02327.0152.0281.0240.0
03325.021.0157.0497.0
0490.00.0903.07.0
057.01.0988.04.0
066.01.0992.01.0
071.02.0996.01.0
08988.05.04.03.0
09121.069.0155.0655.0
1014.0234.0182.0570.0
11222.0158.0270.0350.0
12231.0166.0373.0230.0
PFM
ACGT
010.4070.1290.2920.172
020.3270.1520.2810.24
030.3250.0210.1570.497
040.090.00.9030.007
050.0070.0010.9880.004
060.0060.0010.9920.001
070.0010.0020.9960.001
080.9880.0050.0040.003
090.1210.0690.1550.655
100.0140.2340.1820.57
110.2220.1580.270.35
120.2310.1660.3730.23
PWM
ACGT
010.485-0.6550.154-0.371
020.267-0.4930.116-0.041
030.261-2.405-0.4610.684
04-1.01-4.9821.279-3.362
05-3.362-4.5251.369-3.783
06-3.484-4.5251.373-4.525
07-4.525-4.2131.377-4.525
081.369-3.622-3.783-3.975
09-0.718-1.27-0.4740.959
10-2.773-0.066-0.3150.82
11-0.118-0.4550.0760.335
12-0.078-0.4060.398-0.083
Standard thresholds
P-value Threshold
0.001 4.24058
0.0005 5.64769
0.0001 7.66944