MotifMYT1L.H12INVIVO.0.P.C
Gene (human)MYT1L
(GeneCards)
Gene synonyms (human)KIAA1106
Gene (mouse)Myt1l
Gene synonyms (mouse)Kiaa1106, Nzf1, Png1
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
C
Motif length8
ConsensusvRAAGTTb
GC content31.88%
Information content (bits; total / per base)9.299 / 1.162
Data sourcesChIP-Seq
Aligned words994

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Mouse 1 (6) 0.654 0.68 0.474 0.51 0.622 0.639 1.42 1.525 28.93 42.066
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2HC zinc finger factors {2.7} (TFClass)
TF familyMYT {2.7.1} (TFClass)
TF subfamily {2.7.1.0} (TFClass)
TFClass IDTFClass: 2.7.1.0.2
HGNCHGNC:7623
MGIMGI:1100511
EntrezGene (human)GeneID:23040
(SSTAR profile)
EntrezGene (mouse)GeneID:17933
(SSTAR profile)
UniProt ID (human)MYT1L_HUMAN
UniProt ID (mouse)MYT1L_MOUSE
UniProt AC (human)Q9UL68
(TFClass)
UniProt AC (mouse)P97500
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 0 human, 1 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01352.0149.0382.0111.0
02560.0119.0274.041.0
03965.07.021.01.0
04973.01.07.013.0
054.00.0989.01.0
066.07.02.0979.0
0739.021.0110.0824.0
08138.0231.0215.0410.0
PFM
ACGT
010.3540.150.3840.112
020.5630.120.2760.041
030.9710.0070.0210.001
040.9790.0010.0070.013
050.0040.00.9950.001
060.0060.0070.0020.985
070.0390.0210.1110.829
080.1390.2320.2160.412
PWM
ACGT
010.346-0.5070.428-0.797
020.809-0.7290.097-1.768
031.352-3.356-2.399-4.52
041.36-4.52-3.356-2.833
05-3.777-4.9771.376-4.52
06-3.478-3.356-4.2071.366
07-1.816-2.399-0.8061.194
08-0.583-0.073-0.1440.498
Standard thresholds
P-value Threshold
0.001 5.041215
0.0005 6.14676
0.0001 7.62782