| Motif | MYT1L.H12INVITRO.0.P.D |
| Gene (human) | MYT1L (GeneCards) |
| Gene synonyms (human) | KIAA1106 |
| Gene (mouse) | Myt1l |
| Gene synonyms (mouse) | Kiaa1106, Nzf1, Png1 |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | D |
| Motif | MYT1L.H12INVITRO.0.P.D |
| Gene (human) | MYT1L (GeneCards) |
| Gene synonyms (human) | KIAA1106 |
| Gene (mouse) | Myt1l |
| Gene synonyms (mouse) | Kiaa1106, Nzf1, Png1 |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | D |
| Motif length | 8 |
| Consensus | vRAAGTTb |
| GC content | 31.88% |
| Information content (bits; total / per base) | 9.299 / 1.162 |
| Data sources | ChIP-Seq |
| Aligned words | 994 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Mouse | 1 (6) | 0.654 | 0.68 | 0.474 | 0.51 | 0.622 | 0.639 | 1.42 | 1.525 | 28.93 | 42.066 |
| TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
| TF class | C2HC zinc finger factors {2.7} (TFClass) |
| TF family | MYT {2.7.1} (TFClass) |
| TF subfamily | {2.7.1.0} (TFClass) |
| TFClass ID | TFClass: 2.7.1.0.2 |
| HGNC | HGNC:7623 |
| MGI | MGI:1100511 |
| EntrezGene (human) | GeneID:23040 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:17933 (SSTAR profile) |
| UniProt ID (human) | MYT1L_HUMAN |
| UniProt ID (mouse) | MYT1L_MOUSE |
| UniProt AC (human) | Q9UL68 (TFClass) |
| UniProt AC (mouse) | P97500 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 0 human, 1 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 0 |
| PCM | MYT1L.H12INVITRO.0.P.D.pcm |
| PWM | MYT1L.H12INVITRO.0.P.D.pwm |
| PFM | MYT1L.H12INVITRO.0.P.D.pfm |
| Alignment | MYT1L.H12INVITRO.0.P.D.words.tsv |
| Threshold to P-value map | MYT1L.H12INVITRO.0.P.D.thr |
| Motif in other formats | |
| JASPAR format | MYT1L.H12INVITRO.0.P.D_jaspar_format.txt |
| MEME format | MYT1L.H12INVITRO.0.P.D_meme_format.meme |
| Transfac format | MYT1L.H12INVITRO.0.P.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 352.0 | 149.0 | 382.0 | 111.0 |
| 02 | 560.0 | 119.0 | 274.0 | 41.0 |
| 03 | 965.0 | 7.0 | 21.0 | 1.0 |
| 04 | 973.0 | 1.0 | 7.0 | 13.0 |
| 05 | 4.0 | 0.0 | 989.0 | 1.0 |
| 06 | 6.0 | 7.0 | 2.0 | 979.0 |
| 07 | 39.0 | 21.0 | 110.0 | 824.0 |
| 08 | 138.0 | 231.0 | 215.0 | 410.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.354 | 0.15 | 0.384 | 0.112 |
| 02 | 0.563 | 0.12 | 0.276 | 0.041 |
| 03 | 0.971 | 0.007 | 0.021 | 0.001 |
| 04 | 0.979 | 0.001 | 0.007 | 0.013 |
| 05 | 0.004 | 0.0 | 0.995 | 0.001 |
| 06 | 0.006 | 0.007 | 0.002 | 0.985 |
| 07 | 0.039 | 0.021 | 0.111 | 0.829 |
| 08 | 0.139 | 0.232 | 0.216 | 0.412 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.346 | -0.507 | 0.428 | -0.797 |
| 02 | 0.809 | -0.729 | 0.097 | -1.768 |
| 03 | 1.352 | -3.356 | -2.399 | -4.52 |
| 04 | 1.36 | -4.52 | -3.356 | -2.833 |
| 05 | -3.777 | -4.977 | 1.376 | -4.52 |
| 06 | -3.478 | -3.356 | -4.207 | 1.366 |
| 07 | -1.816 | -2.399 | -0.806 | 1.194 |
| 08 | -0.583 | -0.073 | -0.144 | 0.498 |
| P-value | Threshold |
|---|---|
| 0.001 | 5.041215 |
| 0.0005 | 6.14676 |
| 0.0001 | 7.62782 |