MotifMYC.H12CORE.0.P.B
Gene (human)MYC
(GeneCards)
Gene synonyms (human)BHLHE39
Gene (mouse)Myc
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
B
Motif length10
ConsensusvvCACGYGSh
GC content66.89%
Information content (bits; total / per base)10.301 / 1.03
Data sourcesChIP-Seq
Aligned words1000

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 113 (715) 0.867 0.941 0.774 0.886 0.801 0.917 2.626 3.478 161.959 380.377
Mouse 79 (488) 0.874 0.948 0.774 0.893 0.811 0.912 2.578 3.217 138.433 474.26

rSNP benchmarking, ADASTRA odds-ratio -log-Fisher's P Pearson r Kendall tau
# 100.0 7.335 0.269 0.178
TF superclassBasic domains {1} (TFClass)
TF classBasic helix-loop-helix factors (bHLH) {1.2} (TFClass)
TF familybHLH-ZIP {1.2.6} (TFClass)
TF subfamilyMYC {1.2.6.5} (TFClass)
TFClass IDTFClass: 1.2.6.5.1
HGNCHGNC:7553
MGIMGI:97250
EntrezGene (human)GeneID:4609
(SSTAR profile)
EntrezGene (mouse)GeneID:17869
(SSTAR profile)
UniProt ID (human)MYC_HUMAN
UniProt ID (mouse)MYC_MOUSE
UniProt AC (human)P01106
(TFClass)
UniProt AC (mouse)P01108
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 113 human, 79 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01294.0340.0242.0124.0
02268.0375.0291.066.0
0324.0974.02.00.0
04989.01.04.06.0
054.0780.09.0207.0
0614.010.0974.02.0
0768.0245.02.0685.0
082.017.0930.051.0
0927.0238.0708.027.0
10174.0380.0167.0279.0
PFM
ACGT
010.2940.340.2420.124
020.2680.3750.2910.066
030.0240.9740.0020.0
040.9890.0010.0040.006
050.0040.780.0090.207
060.0140.010.9740.002
070.0680.2450.0020.685
080.0020.0170.930.051
090.0270.2380.7080.027
100.1740.380.1670.279
PWM
ACGT
010.1610.306-0.032-0.694
020.0690.4030.151-1.313
03-2.2811.355-4.213-4.982
041.37-4.525-3.783-3.484
05-3.7831.133-3.156-0.187
06-2.773-3.0661.355-4.213
07-1.284-0.02-4.2131.004
08-4.213-2.5981.309-1.563
09-2.171-0.0491.037-2.171
10-0.3590.416-0.40.109
Standard thresholds
P-value Threshold
0.001 4.58916
0.0005 5.641855
0.0001 7.661175