| Motif | MYBB.H12INVIVO.1.S.D |
| Gene (human) | MYBL2 (GeneCards) |
| Gene synonyms (human) | BMYB |
| Gene (mouse) | Mybl2 |
| Gene synonyms (mouse) | Bmyb |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 1 |
| Quality | D |
| Motif | MYBB.H12INVIVO.1.S.D |
| Gene (human) | MYBL2 (GeneCards) |
| Gene synonyms (human) | BMYB |
| Gene (mouse) | Mybl2 |
| Gene synonyms (mouse) | Bmyb |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 1 |
| Quality | D |
| Motif length | 9 |
| Consensus | ddCCGTTRn |
| GC content | 48.55% |
| Information content (bits; total / per base) | 9.327 / 1.036 |
| Data sources | HT-SELEX |
| Aligned words | 8567 |
| HT-SELEX benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
|---|---|---|---|---|---|---|---|
| Non-Methyl HT-SELEX, 4 experiments | median | 0.984 | 0.977 | 0.938 | 0.928 | 0.843 | 0.844 |
| best | 0.997 | 0.995 | 0.993 | 0.989 | 0.984 | 0.977 | |
| TF superclass | Helix-turn-helix domains {3} (TFClass) |
| TF class | Tryptophan cluster factors {3.5} (TFClass) |
| TF family | Myb/SANT domain {3.5.1} (TFClass) |
| TF subfamily | Myb-like {3.5.1.1} (TFClass) |
| TFClass ID | TFClass: 3.5.1.1.3 |
| HGNC | HGNC:7548 |
| MGI | MGI:101785 |
| EntrezGene (human) | GeneID:4605 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:17865 (SSTAR profile) |
| UniProt ID (human) | MYBB_HUMAN |
| UniProt ID (mouse) | MYBB_MOUSE |
| UniProt AC (human) | P10244 (TFClass) |
| UniProt AC (mouse) | P48972 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 0 human, 0 mouse |
| HT-SELEX | 4 |
| Methyl-HT-SELEX | 0 |
| PCM | MYBB.H12INVIVO.1.S.D.pcm |
| PWM | MYBB.H12INVIVO.1.S.D.pwm |
| PFM | MYBB.H12INVIVO.1.S.D.pfm |
| Alignment | MYBB.H12INVIVO.1.S.D.words.tsv |
| Threshold to P-value map | MYBB.H12INVIVO.1.S.D.thr |
| Motif in other formats | |
| JASPAR format | MYBB.H12INVIVO.1.S.D_jaspar_format.txt |
| MEME format | MYBB.H12INVIVO.1.S.D_meme_format.meme |
| Transfac format | MYBB.H12INVIVO.1.S.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 3209.5 | 1137.5 | 3052.5 | 1167.5 |
| 02 | 3762.5 | 942.5 | 2130.5 | 1731.5 |
| 03 | 402.0 | 7453.0 | 438.0 | 274.0 |
| 04 | 785.0 | 6927.0 | 845.0 | 10.0 |
| 05 | 0.0 | 0.0 | 8567.0 | 0.0 |
| 06 | 0.0 | 0.0 | 0.0 | 8567.0 |
| 07 | 0.0 | 0.0 | 0.0 | 8567.0 |
| 08 | 5853.0 | 459.0 | 1498.0 | 757.0 |
| 09 | 2756.25 | 2045.25 | 1937.25 | 1828.25 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.375 | 0.133 | 0.356 | 0.136 |
| 02 | 0.439 | 0.11 | 0.249 | 0.202 |
| 03 | 0.047 | 0.87 | 0.051 | 0.032 |
| 04 | 0.092 | 0.809 | 0.099 | 0.001 |
| 05 | 0.0 | 0.0 | 1.0 | 0.0 |
| 06 | 0.0 | 0.0 | 0.0 | 1.0 |
| 07 | 0.0 | 0.0 | 0.0 | 1.0 |
| 08 | 0.683 | 0.054 | 0.175 | 0.088 |
| 09 | 0.322 | 0.239 | 0.226 | 0.213 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.404 | -0.632 | 0.354 | -0.606 |
| 02 | 0.563 | -0.819 | -0.005 | -0.212 |
| 03 | -1.668 | 1.246 | -1.583 | -2.049 |
| 04 | -1.002 | 1.173 | -0.928 | -5.164 |
| 05 | -6.853 | -6.853 | 1.386 | -6.853 |
| 06 | -6.853 | -6.853 | -6.853 | 1.386 |
| 07 | -6.853 | -6.853 | -6.853 | 1.386 |
| 08 | 1.005 | -1.536 | -0.357 | -1.038 |
| 09 | 0.252 | -0.046 | -0.1 | -0.158 |
| P-value | Threshold |
|---|---|
| 0.001 | 5.21576 |
| 0.0005 | 5.96742 |
| 0.0001 | 7.484125 |