| Motif | MYBB.H12INVIVO.0.S.D |
| Gene (human) | MYBL2 (GeneCards) |
| Gene synonyms (human) | BMYB |
| Gene (mouse) | Mybl2 |
| Gene synonyms (mouse) | Bmyb |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | D |
| Motif | MYBB.H12INVIVO.0.S.D |
| Gene (human) | MYBL2 (GeneCards) |
| Gene synonyms (human) | BMYB |
| Gene (mouse) | Mybl2 |
| Gene synonyms (mouse) | Bmyb |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | D |
| Motif length | 15 |
| Consensus | nbAACCGTTAWMbSn |
| GC content | 47.4% |
| Information content (bits; total / per base) | 15.963 / 1.064 |
| Data sources | HT-SELEX |
| Aligned words | 662 |
| HT-SELEX benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
|---|---|---|---|---|---|---|---|
| Non-Methyl HT-SELEX, 4 experiments | median | 0.982 | 0.975 | 0.925 | 0.916 | 0.832 | 0.834 |
| best | 0.996 | 0.994 | 0.99 | 0.985 | 0.979 | 0.97 | |
| TF superclass | Helix-turn-helix domains {3} (TFClass) |
| TF class | Tryptophan cluster factors {3.5} (TFClass) |
| TF family | Myb/SANT domain {3.5.1} (TFClass) |
| TF subfamily | Myb-like {3.5.1.1} (TFClass) |
| TFClass ID | TFClass: 3.5.1.1.3 |
| HGNC | HGNC:7548 |
| MGI | MGI:101785 |
| EntrezGene (human) | GeneID:4605 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:17865 (SSTAR profile) |
| UniProt ID (human) | MYBB_HUMAN |
| UniProt ID (mouse) | MYBB_MOUSE |
| UniProt AC (human) | P10244 (TFClass) |
| UniProt AC (mouse) | P48972 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 0 human, 0 mouse |
| HT-SELEX | 4 |
| Methyl-HT-SELEX | 0 |
| PCM | MYBB.H12INVIVO.0.S.D.pcm |
| PWM | MYBB.H12INVIVO.0.S.D.pwm |
| PFM | MYBB.H12INVIVO.0.S.D.pfm |
| Alignment | MYBB.H12INVIVO.0.S.D.words.tsv |
| Threshold to P-value map | MYBB.H12INVIVO.0.S.D.thr |
| Motif in other formats | |
| JASPAR format | MYBB.H12INVIVO.0.S.D_jaspar_format.txt |
| MEME format | MYBB.H12INVIVO.0.S.D_meme_format.meme |
| Transfac format | MYBB.H12INVIVO.0.S.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 192.75 | 172.75 | 146.75 | 149.75 |
| 02 | 102.25 | 203.25 | 120.25 | 236.25 |
| 03 | 502.0 | 6.0 | 151.0 | 3.0 |
| 04 | 586.0 | 0.0 | 48.0 | 28.0 |
| 05 | 0.0 | 662.0 | 0.0 | 0.0 |
| 06 | 0.0 | 559.0 | 103.0 | 0.0 |
| 07 | 0.0 | 0.0 | 662.0 | 0.0 |
| 08 | 0.0 | 0.0 | 0.0 | 662.0 |
| 09 | 0.0 | 0.0 | 0.0 | 662.0 |
| 10 | 654.0 | 0.0 | 8.0 | 0.0 |
| 11 | 492.0 | 41.0 | 35.0 | 94.0 |
| 12 | 154.0 | 440.0 | 14.0 | 54.0 |
| 13 | 91.0 | 190.0 | 270.0 | 111.0 |
| 14 | 83.0 | 132.0 | 396.0 | 51.0 |
| 15 | 131.0 | 200.0 | 147.0 | 184.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.291 | 0.261 | 0.222 | 0.226 |
| 02 | 0.154 | 0.307 | 0.182 | 0.357 |
| 03 | 0.758 | 0.009 | 0.228 | 0.005 |
| 04 | 0.885 | 0.0 | 0.073 | 0.042 |
| 05 | 0.0 | 1.0 | 0.0 | 0.0 |
| 06 | 0.0 | 0.844 | 0.156 | 0.0 |
| 07 | 0.0 | 0.0 | 1.0 | 0.0 |
| 08 | 0.0 | 0.0 | 0.0 | 1.0 |
| 09 | 0.0 | 0.0 | 0.0 | 1.0 |
| 10 | 0.988 | 0.0 | 0.012 | 0.0 |
| 11 | 0.743 | 0.062 | 0.053 | 0.142 |
| 12 | 0.233 | 0.665 | 0.021 | 0.082 |
| 13 | 0.137 | 0.287 | 0.408 | 0.168 |
| 14 | 0.125 | 0.199 | 0.598 | 0.077 |
| 15 | 0.198 | 0.302 | 0.222 | 0.278 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.151 | 0.042 | -0.119 | -0.099 |
| 02 | -0.476 | 0.204 | -0.316 | 0.353 |
| 03 | 1.103 | -3.087 | -0.091 | -3.588 |
| 04 | 1.257 | -4.634 | -1.214 | -1.73 |
| 05 | -4.634 | 1.379 | -4.634 | -4.634 |
| 06 | -4.634 | 1.21 | -0.468 | -4.634 |
| 07 | -4.634 | -4.634 | 1.379 | -4.634 |
| 08 | -4.634 | -4.634 | -4.634 | 1.379 |
| 09 | -4.634 | -4.634 | -4.634 | 1.379 |
| 10 | 1.367 | -4.634 | -2.854 | -4.634 |
| 11 | 1.083 | -1.366 | -1.518 | -0.558 |
| 12 | -0.071 | 0.972 | -2.37 | -1.1 |
| 13 | -0.59 | 0.137 | 0.486 | -0.395 |
| 14 | -0.681 | -0.224 | 0.867 | -1.156 |
| 15 | -0.231 | 0.188 | -0.117 | 0.105 |
| P-value | Threshold |
|---|---|
| 0.001 | 1.63821 |
| 0.0005 | 3.08966 |
| 0.0001 | 6.086665 |