MotifMYBA.H12INVIVO.1.PS.A
Gene (human)MYBL1
(GeneCards)
Gene synonyms (human)AMYB
Gene (mouse)Mybl1
Gene synonyms (mouse)Amyb
LOGO
LOGO (reverse complement)
Motif subtype1
Quality
A
Motif length9
ConsensusRRCvGTTRv
GC content56.42%
Information content (bits; total / per base)9.593 / 1.066
Data sourcesChIP-Seq + HT-SELEX
Aligned words142

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (7) 0.825 0.87 0.761 0.79 0.72 0.78 2.085 2.271 16.102 18.569
Mouse 2 (14) 0.895 0.923 0.825 0.879 0.837 0.866 2.826 3.013 188.581 281.77

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Non-Methyl HT-SELEX, 2 experiments median 0.928 0.884 0.88 0.843 0.788 0.77
best 0.965 0.935 0.956 0.925 0.885 0.862
TF superclassHelix-turn-helix domains {3} (TFClass)
TF classTryptophan cluster factors {3.5} (TFClass)
TF familyMyb/SANT domain {3.5.1} (TFClass)
TF subfamilyMyb-like {3.5.1.1} (TFClass)
TFClass IDTFClass: 3.5.1.1.2
HGNCHGNC:7547
MGIMGI:99925
EntrezGene (human)GeneID:4603
(SSTAR profile)
EntrezGene (mouse)GeneID:17864
(SSTAR profile)
UniProt ID (human)MYBA_HUMAN
UniProt ID (mouse)MYBA_MOUSE
UniProt AC (human)P10243
(TFClass)
UniProt AC (mouse)P51960
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 2 mouse
HT-SELEX 2
Methyl-HT-SELEX 0
PCM
ACGT
0149.07.077.09.0
0241.03.087.011.0
034.0133.03.02.0
0450.053.038.01.0
053.02.0135.02.0
060.00.00.0142.0
070.00.00.0142.0
0845.06.082.09.0
0934.023.072.013.0
PFM
ACGT
010.3450.0490.5420.063
020.2890.0210.6130.077
030.0280.9370.0210.014
040.3520.3730.2680.007
050.0210.0140.9510.014
060.00.00.01.0
070.00.00.01.0
080.3170.0420.5770.063
090.2390.1620.5070.092
PWM
ACGT
010.313-1.4950.756-1.278
020.14-2.160.876-1.099
03-1.9481.296-2.16-2.429
040.3330.390.066-2.798
05-2.16-2.4291.311-2.429
06-3.39-3.39-3.391.361
07-3.39-3.39-3.391.361
080.23-1.6240.818-1.278
09-0.042-0.4160.69-0.948
Standard thresholds
P-value Threshold
0.001 4.94107
0.0005 5.861465
0.0001 7.479945