MotifMYBA.H12CORE.2.S.B
Gene (human)MYBL1
(GeneCards)
Gene synonyms (human)AMYB
Gene (mouse)Mybl1
Gene synonyms (mouse)Amyb
LOGO
LOGO (reverse complement)
Motif subtype2
Quality
B
Motif length14
ConsensusndRCMGTTAACbvn
GC content46.82%
Information content (bits; total / per base)15.302 / 1.093
Data sourcesHT-SELEX
Aligned words588

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (7) 0.786 0.812 0.639 0.703 0.567 0.643 1.377 1.769 3.42 4.602
Mouse 2 (14) 0.811 0.832 0.634 0.664 0.584 0.614 1.418 1.505 28.387 37.509

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Non-Methyl HT-SELEX, 2 experiments median 0.936 0.916 0.867 0.846 0.768 0.761
best 0.985 0.979 0.953 0.938 0.866 0.853
TF superclassHelix-turn-helix domains {3} (TFClass)
TF classTryptophan cluster factors {3.5} (TFClass)
TF familyMyb/SANT domain {3.5.1} (TFClass)
TF subfamilyMyb-like {3.5.1.1} (TFClass)
TFClass IDTFClass: 3.5.1.1.2
HGNCHGNC:7547
MGIMGI:99925
EntrezGene (human)GeneID:4603
(SSTAR profile)
EntrezGene (mouse)GeneID:17864
(SSTAR profile)
UniProt ID (human)MYBA_HUMAN
UniProt ID (mouse)MYBA_MOUSE
UniProt AC (human)P10243
(TFClass)
UniProt AC (mouse)P51960
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 2 mouse
HT-SELEX 2
Methyl-HT-SELEX 0
PCM
ACGT
01160.75137.75120.75168.75
02285.2550.25149.25103.25
03410.02.0103.073.0
040.0588.00.00.0
0587.0430.071.00.0
060.00.0588.00.0
070.00.00.0588.0
080.00.00.0588.0
09586.00.02.00.0
10568.01.07.012.0
1189.0479.04.016.0
1268.0154.0266.0100.0
1389.591.5323.583.5
14147.5163.5122.5154.5
PFM
ACGT
010.2730.2340.2050.287
020.4850.0850.2540.176
030.6970.0030.1750.124
040.01.00.00.0
050.1480.7310.1210.0
060.00.01.00.0
070.00.00.01.0
080.00.00.01.0
090.9970.00.0030.0
100.9660.0020.0120.02
110.1510.8150.0070.027
120.1160.2620.4520.17
130.1520.1560.550.142
140.2510.2780.2080.263
PWM
ACGT
010.088-0.064-0.1940.137
020.658-1.0530.015-0.349
031.019-3.722-0.351-0.689
04-4.5351.378-4.535-4.535
05-0.5171.066-0.716-4.535
06-4.535-4.5351.378-4.535
07-4.535-4.535-4.5351.378
08-4.535-4.535-4.5351.378
091.375-4.535-3.722-4.535
101.344-4.048-2.85-2.392
11-0.4951.174-3.279-2.134
12-0.7590.0460.588-0.38
13-0.489-0.4680.783-0.557
140.0030.105-0.180.049
Standard thresholds
P-value Threshold
0.001 2.04911
0.0005 3.48391
0.0001 6.256415