MotifMYBA.H12CORE.0.P.B
Gene (human)MYBL1
(GeneCards)
Gene synonyms (human)AMYB
Gene (mouse)Mybl1
Gene synonyms (mouse)Amyb
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
B
Motif length15
ConsensusvvbRRCvGTTdvnvv
GC content56.49%
Information content (bits; total / per base)10.431 / 0.695
Data sourcesChIP-Seq
Aligned words442

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (7) 0.78 0.834 0.716 0.755 0.711 0.763 2.2 2.461 10.469 14.301
Mouse 2 (14) 0.897 0.922 0.82 0.871 0.844 0.871 4.029 4.393 201.039 335.284

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Non-Methyl HT-SELEX, 2 experiments median 0.906 0.86 0.85 0.811 0.757 0.738
best 0.957 0.926 0.933 0.899 0.847 0.823
TF superclassHelix-turn-helix domains {3} (TFClass)
TF classTryptophan cluster factors {3.5} (TFClass)
TF familyMyb/SANT domain {3.5.1} (TFClass)
TF subfamilyMyb-like {3.5.1.1} (TFClass)
TFClass IDTFClass: 3.5.1.1.2
HGNCHGNC:7547
MGIMGI:99925
EntrezGene (human)GeneID:4603
(SSTAR profile)
EntrezGene (mouse)GeneID:17864
(SSTAR profile)
UniProt ID (human)MYBA_HUMAN
UniProt ID (mouse)MYBA_MOUSE
UniProt AC (human)P10243
(TFClass)
UniProt AC (mouse)P51960
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 2 mouse
HT-SELEX 2
Methyl-HT-SELEX 0
PCM
ACGT
01179.062.0149.052.0
0267.082.0241.052.0
0364.0118.065.0195.0
0460.019.0320.043.0
05118.07.0274.043.0
068.0423.09.02.0
07173.0124.0125.020.0
082.03.0433.04.0
093.04.01.0434.0
101.00.04.0437.0
11158.012.0203.069.0
1286.0133.0187.036.0
13154.094.0115.079.0
1482.094.0204.062.0
15154.0108.0132.048.0
PFM
ACGT
010.4050.140.3370.118
020.1520.1860.5450.118
030.1450.2670.1470.441
040.1360.0430.7240.097
050.2670.0160.620.097
060.0180.9570.020.005
070.3910.2810.2830.045
080.0050.0070.980.009
090.0070.0090.0020.982
100.0020.00.0090.989
110.3570.0270.4590.156
120.1950.3010.4230.081
130.3480.2130.260.179
140.1860.2130.4620.14
150.3480.2440.2990.109
PWM
ACGT
010.477-0.5670.295-0.739
02-0.492-0.2940.772-0.739
03-0.5360.065-0.5210.562
04-0.599-1.6971.054-0.923
050.065-2.5760.9-0.923
06-2.4651.332-2.365-3.459
070.4430.1140.122-1.65
08-3.459-3.211.356-3.01
09-3.21-3.01-3.7931.358
10-3.793-4.298-3.011.365
110.353-2.1140.602-0.463
12-0.2470.1830.521-1.094
130.328-0.1590.039-0.33
14-0.294-0.1590.607-0.567
150.328-0.0230.176-0.816
Standard thresholds
P-value Threshold
0.001 4.71211
0.0005 5.66576
0.0001 7.43761