| Motif | MXI1.H12RSNP.0.P.B |
| Gene (human) | MXI1 (GeneCards) |
| Gene synonyms (human) | BHLHC11 |
| Gene (mouse) | Mxi1 |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | B |
| Motif | MXI1.H12RSNP.0.P.B |
| Gene (human) | MXI1 (GeneCards) |
| Gene synonyms (human) | BHLHC11 |
| Gene (mouse) | Mxi1 |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | B |
| Motif length | 9 |
| Consensus | MRCGTGKbb |
| GC content | 63.47% |
| Information content (bits; total / per base) | 8.106 / 0.901 |
| Data sources | ChIP-Seq |
| Aligned words | 834 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 1 (6) | 0.811 | 0.826 | 0.737 | 0.756 | 0.753 | 0.77 | 2.553 | 2.631 | 178.418 | 228.086 |
| Mouse | 2 (13) | 0.846 | 0.897 | 0.765 | 0.849 | 0.8 | 0.858 | 2.855 | 3.261 | 200.481 | 336.222 |
| rSNP benchmarking, ADASTRA | odds-ratio | -log-Fisher's P | Pearson r | Kendall tau |
|---|---|---|---|---|
| # | 9.546 | 3.423 | 0.118 | 0.072 |
| TF superclass | Basic domains {1} (TFClass) |
| TF class | Basic helix-loop-helix factors (bHLH) {1.2} (TFClass) |
| TF family | bHLH-ZIP {1.2.6} (TFClass) |
| TF subfamily | MAD {1.2.6.7} (TFClass) |
| TFClass ID | TFClass: 1.2.6.7.5 |
| HGNC | HGNC:7534 |
| MGI | MGI:97245 |
| EntrezGene (human) | GeneID:4601 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:17859 (SSTAR profile) |
| UniProt ID (human) | MXI1_HUMAN |
| UniProt ID (mouse) | MXI1_MOUSE |
| UniProt AC (human) | P50539 (TFClass) |
| UniProt AC (mouse) | P50540 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 1 human, 2 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 0 |
| PCM | MXI1.H12RSNP.0.P.B.pcm |
| PWM | MXI1.H12RSNP.0.P.B.pwm |
| PFM | MXI1.H12RSNP.0.P.B.pfm |
| Alignment | MXI1.H12RSNP.0.P.B.words.tsv |
| Threshold to P-value map | MXI1.H12RSNP.0.P.B.thr |
| Motif in other formats | |
| JASPAR format | MXI1.H12RSNP.0.P.B_jaspar_format.txt |
| MEME format | MXI1.H12RSNP.0.P.B_meme_format.meme |
| Transfac format | MXI1.H12RSNP.0.P.B_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 84.0 | 665.0 | 35.0 | 50.0 |
| 02 | 551.0 | 22.0 | 177.0 | 84.0 |
| 03 | 19.0 | 665.0 | 40.0 | 110.0 |
| 04 | 25.0 | 104.0 | 693.0 | 12.0 |
| 05 | 9.0 | 6.0 | 5.0 | 814.0 |
| 06 | 7.0 | 13.0 | 803.0 | 11.0 |
| 07 | 7.0 | 152.0 | 495.0 | 180.0 |
| 08 | 96.0 | 261.0 | 204.0 | 273.0 |
| 09 | 104.0 | 270.0 | 154.0 | 306.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.101 | 0.797 | 0.042 | 0.06 |
| 02 | 0.661 | 0.026 | 0.212 | 0.101 |
| 03 | 0.023 | 0.797 | 0.048 | 0.132 |
| 04 | 0.03 | 0.125 | 0.831 | 0.014 |
| 05 | 0.011 | 0.007 | 0.006 | 0.976 |
| 06 | 0.008 | 0.016 | 0.963 | 0.013 |
| 07 | 0.008 | 0.182 | 0.594 | 0.216 |
| 08 | 0.115 | 0.313 | 0.245 | 0.327 |
| 09 | 0.125 | 0.324 | 0.185 | 0.367 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.897 | 1.154 | -1.746 | -1.403 |
| 02 | 0.967 | -2.183 | -0.162 | -0.897 |
| 03 | -2.319 | 1.154 | -1.618 | -0.632 |
| 04 | -2.064 | -0.688 | 1.195 | -2.732 |
| 05 | -2.979 | -3.309 | -3.449 | 1.356 |
| 06 | -3.187 | -2.661 | 1.342 | -2.808 |
| 07 | -3.187 | -0.313 | 0.86 | -0.146 |
| 08 | -0.766 | 0.223 | -0.022 | 0.268 |
| 09 | -0.688 | 0.257 | -0.3 | 0.381 |
| P-value | Threshold |
|---|---|
| 0.001 | 5.053075 |
| 0.0005 | 5.753485 |
| 0.0001 | 7.29422 |