| Motif | MNT.H12CORE.0.PS.A |
| Gene (human) | MNT (GeneCards) |
| Gene synonyms (human) | BHLHD3, ROX |
| Gene (mouse) | Mnt |
| Gene synonyms (mouse) | Rox |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | A |
| Motif | MNT.H12CORE.0.PS.A |
| Gene (human) | MNT (GeneCards) |
| Gene synonyms (human) | BHLHD3, ROX |
| Gene (mouse) | Mnt |
| Gene synonyms (mouse) | Rox |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | A |
| Motif length | 9 |
| Consensus | vbCACGTGK |
| GC content | 67.35% |
| Information content (bits; total / per base) | 11.064 / 1.229 |
| Data sources | ChIP-Seq + HT-SELEX |
| Aligned words | 999 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 6 (42) | 0.911 | 0.937 | 0.832 | 0.87 | 0.829 | 0.874 | 2.624 | 2.993 | 237.014 | 338.26 |
| HT-SELEX benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
|---|---|---|---|---|---|---|---|
| Non-Methyl HT-SELEX, 2 experiments | median | 0.674 | 0.67 | 0.584 | 0.591 | 0.546 | 0.554 |
| best | 0.708 | 0.709 | 0.597 | 0.61 | 0.552 | 0.565 | |
| TF superclass | Basic domains {1} (TFClass) |
| TF class | Basic helix-loop-helix factors (bHLH) {1.2} (TFClass) |
| TF family | bHLH-ZIP {1.2.6} (TFClass) |
| TF subfamily | MAD {1.2.6.7} (TFClass) |
| TFClass ID | TFClass: 1.2.6.7.6 |
| HGNC | HGNC:7188 |
| MGI | MGI:109150 |
| EntrezGene (human) | GeneID:4335 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:17428 (SSTAR profile) |
| UniProt ID (human) | MNT_HUMAN |
| UniProt ID (mouse) | MNT_MOUSE |
| UniProt AC (human) | Q99583 (TFClass) |
| UniProt AC (mouse) | O08789 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 6 human, 0 mouse |
| HT-SELEX | 2 |
| Methyl-HT-SELEX | 0 |
| PCM | MNT.H12CORE.0.PS.A.pcm |
| PWM | MNT.H12CORE.0.PS.A.pwm |
| PFM | MNT.H12CORE.0.PS.A.pfm |
| Alignment | MNT.H12CORE.0.PS.A.words.tsv |
| Threshold to P-value map | MNT.H12CORE.0.PS.A.thr |
| Motif in other formats | |
| JASPAR format | MNT.H12CORE.0.PS.A_jaspar_format.txt |
| MEME format | MNT.H12CORE.0.PS.A_meme_format.meme |
| Transfac format | MNT.H12CORE.0.PS.A_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 348.0 | 228.0 | 333.0 | 90.0 |
| 02 | 147.0 | 246.0 | 449.0 | 157.0 |
| 03 | 13.0 | 975.0 | 10.0 | 1.0 |
| 04 | 861.0 | 8.0 | 98.0 | 32.0 |
| 05 | 7.0 | 968.0 | 9.0 | 15.0 |
| 06 | 85.0 | 3.0 | 906.0 | 5.0 |
| 07 | 15.0 | 17.0 | 7.0 | 960.0 |
| 08 | 6.0 | 2.0 | 977.0 | 14.0 |
| 09 | 28.0 | 59.0 | 760.0 | 152.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.348 | 0.228 | 0.333 | 0.09 |
| 02 | 0.147 | 0.246 | 0.449 | 0.157 |
| 03 | 0.013 | 0.976 | 0.01 | 0.001 |
| 04 | 0.862 | 0.008 | 0.098 | 0.032 |
| 05 | 0.007 | 0.969 | 0.009 | 0.015 |
| 06 | 0.085 | 0.003 | 0.907 | 0.005 |
| 07 | 0.015 | 0.017 | 0.007 | 0.961 |
| 08 | 0.006 | 0.002 | 0.978 | 0.014 |
| 09 | 0.028 | 0.059 | 0.761 | 0.152 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.33 | -0.09 | 0.286 | -1.009 |
| 02 | -0.525 | -0.015 | 0.584 | -0.46 |
| 03 | -2.838 | 1.357 | -3.065 | -4.524 |
| 04 | 1.233 | -3.252 | -0.925 | -2.009 |
| 05 | -3.361 | 1.35 | -3.155 | -2.71 |
| 06 | -1.065 | -3.974 | 1.284 | -3.621 |
| 07 | -2.71 | -2.597 | -3.361 | 1.341 |
| 08 | -3.483 | -4.212 | 1.359 | -2.772 |
| 09 | -2.135 | -1.421 | 1.108 | -0.492 |
| P-value | Threshold |
|---|---|
| 0.001 | 4.383135 |
| 0.0005 | 5.343245 |
| 0.0001 | 7.37209 |