MotifMEOX2.H12INVIVO.0.SM.D
Gene (human)MEOX2
(GeneCards)
Gene synonyms (human)GAX, MOX2
Gene (mouse)Meox2
Gene synonyms (mouse)Gax, Mox-2, Mox2
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length11
ConsensusnvbTAATKRbn
GC content35.16%
Information content (bits; total / per base)10.116 / 0.92
Data sourcesHT-SELEX + Methyl-HT-SELEX
Aligned words9087

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Overall, 6 experiments median 0.905 0.862 0.853 0.811 0.758 0.74
best 0.961 0.938 0.939 0.908 0.899 0.864
Methyl HT-SELEX, 1 experiments median 0.961 0.938 0.939 0.908 0.899 0.864
best 0.961 0.938 0.939 0.908 0.899 0.864
Non-Methyl HT-SELEX, 5 experiments median 0.861 0.807 0.785 0.739 0.679 0.664
best 0.959 0.935 0.924 0.893 0.881 0.84
TF superclassHelix-turn-helix domains {3} (TFClass)
TF classHomeo domain factors {3.1} (TFClass)
TF familyHOX-related {3.1.1} (TFClass)
TF subfamilyMEOX {3.1.1.14} (TFClass)
TFClass IDTFClass: 3.1.1.14.2
HGNCHGNC:7014
MGIMGI:103219
EntrezGene (human)GeneID:4223
(SSTAR profile)
EntrezGene (mouse)GeneID:17286
(SSTAR profile)
UniProt ID (human)MEOX2_HUMAN
UniProt ID (mouse)MEOX2_MOUSE
UniProt AC (human)P50222
(TFClass)
UniProt AC (mouse)P32443
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 0 human, 0 mouse
HT-SELEX 5
Methyl-HT-SELEX 1
PCM
ACGT
012218.252990.252235.251643.25
021884.752554.754177.75469.75
03456.02613.02505.03513.0
040.02.00.09085.0
059051.00.036.00.0
069087.00.00.00.0
070.0177.01.08909.0
086.01267.03219.04595.0
096737.0152.02043.0155.0
10962.754075.751883.752164.75
111666.02700.02509.02212.0
PFM
ACGT
010.2440.3290.2460.181
020.2070.2810.460.052
030.050.2880.2760.387
040.00.00.01.0
050.9960.00.0040.0
061.00.00.00.0
070.00.0190.00.98
080.0010.1390.3540.506
090.7410.0170.2250.017
100.1060.4490.2070.238
110.1830.2970.2760.243
PWM
ACGT
01-0.0240.275-0.016-0.323
02-0.1870.1170.609-1.572
03-1.6020.140.0980.436
04-6.906-6.276-6.9061.385
051.382-6.906-4.084-6.906
061.386-6.906-6.906-6.906
07-6.906-2.54-6.5421.366
08-5.616-0.5830.3480.704
091.086-2.691-0.106-2.671
10-0.8570.584-0.187-0.048
11-0.310.1730.099-0.027
Standard thresholds
P-value Threshold
0.001 4.908775
0.0005 6.222875
0.0001 7.668055