| Motif | MBNL2.H12INVITRO.0.S.C |
| Gene (human) | MBNL2 (GeneCards) |
| Gene synonyms (human) | MBLL, MBLL39, MLP1 |
| Gene (mouse) | Mbnl2 |
| Gene synonyms (mouse) | Kiaa4072 |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | C |
| Motif | MBNL2.H12INVITRO.0.S.C |
| Gene (human) | MBNL2 (GeneCards) |
| Gene synonyms (human) | MBLL, MBLL39, MLP1 |
| Gene (mouse) | Mbnl2 |
| Gene synonyms (mouse) | Kiaa4072 |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | C |
| Motif length | 12 |
| Consensus | nhhYGCTThvbn |
| GC content | 52.08% |
| Information content (bits; total / per base) | 9.566 / 0.797 |
| Data sources | HT-SELEX |
| Aligned words | 8136 |
| HT-SELEX benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
|---|---|---|---|---|---|---|---|
| Non-Methyl HT-SELEX, 1 experiments | median | 0.876 | 0.81 | 0.832 | 0.771 | 0.763 | 0.717 |
| best | 0.876 | 0.81 | 0.832 | 0.771 | 0.763 | 0.717 | |
| rSNP benchmarking, SNP-SELEX | auROC | auPRC | Pearson r | Kendall tau |
|---|---|---|---|---|
| batch 1 | 0.69 | 0.198 | 0.542 | 0.207 |
| batch 2 | 0.553 | 0.153 | 0.326 | 0.271 |
| TF superclass | Yet undefined DNA-binding domains {0} (TFClass) |
| TF class | Uncharacterized {0.0} (TFClass) |
| TF family | Unannotated {0.0.9} (TFClass) |
| TF subfamily | {0.0.9.0} (TFClass) |
| TFClass ID | TFClass: 0.0.9.0.6 |
| HGNC | HGNC:16746 |
| MGI | MGI:2145597 |
| EntrezGene (human) | GeneID:10150 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:105559 (SSTAR profile) |
| UniProt ID (human) | MBNL2_HUMAN |
| UniProt ID (mouse) | MBNL2_MOUSE |
| UniProt AC (human) | Q5VZF2 (TFClass) |
| UniProt AC (mouse) | Q8C181 (TFClass) |
| GRECO-DB-TF | no |
| ChIP-Seq | 0 human, 0 mouse |
| HT-SELEX | 1 |
| Methyl-HT-SELEX | 0 |
| PCM | MBNL2.H12INVITRO.0.S.C.pcm |
| PWM | MBNL2.H12INVITRO.0.S.C.pwm |
| PFM | MBNL2.H12INVITRO.0.S.C.pfm |
| Alignment | MBNL2.H12INVITRO.0.S.C.words.tsv |
| Threshold to P-value map | MBNL2.H12INVITRO.0.S.C.thr |
| Motif in other formats | |
| JASPAR format | MBNL2.H12INVITRO.0.S.C_jaspar_format.txt |
| MEME format | MBNL2.H12INVITRO.0.S.C_meme_format.meme |
| Transfac format | MBNL2.H12INVITRO.0.S.C_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 1806.5 | 2561.5 | 1442.5 | 2325.5 |
| 02 | 1868.75 | 3072.75 | 675.75 | 2518.75 |
| 03 | 2693.0 | 1291.0 | 1132.0 | 3020.0 |
| 04 | 484.0 | 4781.0 | 110.0 | 2761.0 |
| 05 | 1.0 | 11.0 | 8124.0 | 0.0 |
| 06 | 0.0 | 8136.0 | 0.0 | 0.0 |
| 07 | 0.0 | 79.0 | 0.0 | 8057.0 |
| 08 | 0.0 | 0.0 | 0.0 | 8136.0 |
| 09 | 1559.0 | 4472.0 | 299.0 | 1806.0 |
| 10 | 1472.0 | 3281.0 | 2091.0 | 1292.0 |
| 11 | 1369.0 | 3423.0 | 1468.0 | 1876.0 |
| 12 | 1471.25 | 2542.25 | 1851.25 | 2271.25 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.222 | 0.315 | 0.177 | 0.286 |
| 02 | 0.23 | 0.378 | 0.083 | 0.31 |
| 03 | 0.331 | 0.159 | 0.139 | 0.371 |
| 04 | 0.059 | 0.588 | 0.014 | 0.339 |
| 05 | 0.0 | 0.001 | 0.999 | 0.0 |
| 06 | 0.0 | 1.0 | 0.0 | 0.0 |
| 07 | 0.0 | 0.01 | 0.0 | 0.99 |
| 08 | 0.0 | 0.0 | 0.0 | 1.0 |
| 09 | 0.192 | 0.55 | 0.037 | 0.222 |
| 10 | 0.181 | 0.403 | 0.257 | 0.159 |
| 11 | 0.168 | 0.421 | 0.18 | 0.231 |
| 12 | 0.181 | 0.312 | 0.228 | 0.279 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.118 | 0.23 | -0.343 | 0.134 |
| 02 | -0.085 | 0.412 | -1.1 | 0.214 |
| 03 | 0.28 | -0.454 | -0.585 | 0.395 |
| 04 | -1.432 | 0.854 | -2.898 | 0.305 |
| 05 | -6.44 | -5.035 | 1.384 | -6.807 |
| 06 | -6.807 | 1.385 | -6.807 | -6.807 |
| 07 | -6.807 | -3.221 | -6.807 | 1.376 |
| 08 | -6.807 | -6.807 | -6.807 | 1.385 |
| 09 | -0.266 | 0.787 | -1.911 | -0.119 |
| 10 | -0.323 | 0.478 | 0.028 | -0.453 |
| 11 | -0.395 | 0.52 | -0.326 | -0.081 |
| 12 | -0.323 | 0.223 | -0.094 | 0.11 |
| P-value | Threshold |
|---|---|
| 0.001 | 5.452585 |
| 0.0005 | 6.30131 |
| 0.0001 | 7.43896 |