| Motif | MAFG.H12RSNP.0.PSM.A |
| Gene (human) | MAFG (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | Mafg |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | A |
| Motif | MAFG.H12RSNP.0.PSM.A |
| Gene (human) | MAFG (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | Mafg |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | A |
| Motif length | 19 |
| Consensus | dhhdTGCTGASTMAGCRdd |
| GC content | 44.65% |
| Information content (bits; total / per base) | 19.504 / 1.027 |
| Data sources | ChIP-Seq + HT-SELEX + Methyl-HT-SELEX |
| Aligned words | 722 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 2 (14) | 0.869 | 0.913 | 0.866 | 0.904 | 0.891 | 0.944 | 5.202 | 6.523 | 325.615 | 896.367 |
| Mouse | 2 (14) | 0.983 | 0.985 | 0.976 | 0.98 | 0.984 | 0.987 | 7.522 | 7.679 | 691.502 | 860.036 |
| HT-SELEX benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
|---|---|---|---|---|---|---|---|
| Overall, 6 experiments | median | 0.985 | 0.978 | 0.931 | 0.925 | 0.785 | 0.803 |
| best | 1.0 | 1.0 | 0.961 | 0.95 | 0.866 | 0.851 | |
| Methyl HT-SELEX, 2 experiments | median | 0.966 | 0.953 | 0.899 | 0.883 | 0.784 | 0.782 |
| best | 0.989 | 0.984 | 0.957 | 0.946 | 0.853 | 0.847 | |
| Non-Methyl HT-SELEX, 4 experiments | median | 0.986 | 0.978 | 0.931 | 0.925 | 0.785 | 0.803 |
| best | 1.0 | 1.0 | 0.961 | 0.95 | 0.866 | 0.851 | |
| rSNP benchmarking, ADASTRA | odds-ratio | -log-Fisher's P | Pearson r | Kendall tau |
|---|---|---|---|---|
| # | 11.442 | 9.919 | 0.357 | 0.184 |
| rSNP benchmarking, SNP-SELEX | auROC | auPRC | Pearson r | Kendall tau |
|---|---|---|---|---|
| batch 1 | 0.911 | 0.545 | 0.895 | 0.57 |
| batch 2 | 0.667 | 0.428 | 0.741 | 0.544 |
| TF superclass | Basic domains {1} (TFClass) |
| TF class | Basic leucine zipper factors (bZIP) {1.1} (TFClass) |
| TF family | Maf-related {1.1.3} (TFClass) |
| TF subfamily | Small MAF {1.1.3.2} (TFClass) |
| TFClass ID | TFClass: 1.1.3.2.2 |
| HGNC | HGNC:6781 |
| MGI | MGI:96911 |
| EntrezGene (human) | GeneID:4097 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:17134 (SSTAR profile) |
| UniProt ID (human) | MAFG_HUMAN |
| UniProt ID (mouse) | MAFG_MOUSE |
| UniProt AC (human) | O15525 (TFClass) |
| UniProt AC (mouse) | O54790 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 2 human, 2 mouse |
| HT-SELEX | 4 |
| Methyl-HT-SELEX | 2 |
| PCM | MAFG.H12RSNP.0.PSM.A.pcm |
| PWM | MAFG.H12RSNP.0.PSM.A.pwm |
| PFM | MAFG.H12RSNP.0.PSM.A.pfm |
| Alignment | MAFG.H12RSNP.0.PSM.A.words.tsv |
| Threshold to P-value map | MAFG.H12RSNP.0.PSM.A.thr |
| Motif in other formats | |
| JASPAR format | MAFG.H12RSNP.0.PSM.A_jaspar_format.txt |
| MEME format | MAFG.H12RSNP.0.PSM.A_meme_format.meme |
| Transfac format | MAFG.H12RSNP.0.PSM.A_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 320.0 | 92.0 | 118.0 | 192.0 |
| 02 | 318.0 | 55.0 | 51.0 | 298.0 |
| 03 | 323.0 | 54.0 | 49.0 | 296.0 |
| 04 | 292.0 | 83.0 | 128.0 | 219.0 |
| 05 | 28.0 | 76.0 | 6.0 | 612.0 |
| 06 | 0.0 | 0.0 | 721.0 | 1.0 |
| 07 | 0.0 | 722.0 | 0.0 | 0.0 |
| 08 | 1.0 | 1.0 | 0.0 | 720.0 |
| 09 | 1.0 | 0.0 | 721.0 | 0.0 |
| 10 | 722.0 | 0.0 | 0.0 | 0.0 |
| 11 | 27.0 | 433.0 | 227.0 | 35.0 |
| 12 | 23.0 | 19.0 | 37.0 | 643.0 |
| 13 | 106.0 | 545.0 | 13.0 | 58.0 |
| 14 | 610.0 | 17.0 | 39.0 | 56.0 |
| 15 | 24.0 | 8.0 | 606.0 | 84.0 |
| 16 | 18.0 | 628.0 | 61.0 | 15.0 |
| 17 | 436.0 | 38.0 | 143.0 | 105.0 |
| 18 | 260.25 | 102.25 | 128.25 | 231.25 |
| 19 | 216.0 | 81.0 | 123.0 | 302.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.443 | 0.127 | 0.163 | 0.266 |
| 02 | 0.44 | 0.076 | 0.071 | 0.413 |
| 03 | 0.447 | 0.075 | 0.068 | 0.41 |
| 04 | 0.404 | 0.115 | 0.177 | 0.303 |
| 05 | 0.039 | 0.105 | 0.008 | 0.848 |
| 06 | 0.0 | 0.0 | 0.999 | 0.001 |
| 07 | 0.0 | 1.0 | 0.0 | 0.0 |
| 08 | 0.001 | 0.001 | 0.0 | 0.997 |
| 09 | 0.001 | 0.0 | 0.999 | 0.0 |
| 10 | 1.0 | 0.0 | 0.0 | 0.0 |
| 11 | 0.037 | 0.6 | 0.314 | 0.048 |
| 12 | 0.032 | 0.026 | 0.051 | 0.891 |
| 13 | 0.147 | 0.755 | 0.018 | 0.08 |
| 14 | 0.845 | 0.024 | 0.054 | 0.078 |
| 15 | 0.033 | 0.011 | 0.839 | 0.116 |
| 16 | 0.025 | 0.87 | 0.084 | 0.021 |
| 17 | 0.604 | 0.053 | 0.198 | 0.145 |
| 18 | 0.36 | 0.142 | 0.178 | 0.32 |
| 19 | 0.299 | 0.112 | 0.17 | 0.418 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.569 | -0.665 | -0.42 | 0.061 |
| 02 | 0.562 | -1.168 | -1.241 | 0.498 |
| 03 | 0.578 | -1.186 | -1.28 | 0.491 |
| 04 | 0.478 | -0.766 | -0.34 | 0.192 |
| 05 | -1.815 | -0.853 | -3.171 | 1.215 |
| 06 | -4.707 | -4.707 | 1.378 | -4.232 |
| 07 | -4.707 | 1.379 | -4.707 | -4.707 |
| 08 | -4.232 | -4.232 | -4.707 | 1.377 |
| 09 | -4.232 | -4.707 | 1.378 | -4.707 |
| 10 | 1.379 | -4.707 | -4.707 | -4.707 |
| 11 | -1.85 | 0.87 | 0.227 | -1.604 |
| 12 | -2.0 | -2.177 | -1.55 | 1.264 |
| 13 | -0.526 | 1.099 | -2.521 | -1.116 |
| 14 | 1.211 | -2.279 | -1.5 | -1.15 |
| 15 | -1.96 | -2.938 | 1.205 | -0.755 |
| 16 | -2.227 | 1.24 | -1.067 | -2.393 |
| 17 | 0.877 | -1.525 | -0.231 | -0.535 |
| 18 | 0.363 | -0.561 | -0.338 | 0.246 |
| 19 | 0.178 | -0.79 | -0.379 | 0.511 |
| P-value | Threshold |
|---|---|
| 0.001 | 0.11281 |
| 0.0005 | 1.63246 |
| 0.0001 | 4.82491 |