| Motif | MAFG.H12INVIVO.0.PSM.A |
| Gene (human) | MAFG (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | Mafg |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | A |
| Motif | MAFG.H12INVIVO.0.PSM.A |
| Gene (human) | MAFG (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | Mafg |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | A |
| Motif length | 18 |
| Consensus | ddWWnTGCTGASTYRGCW |
| GC content | 46.29% |
| Information content (bits; total / per base) | 18.336 / 1.019 |
| Data sources | ChIP-Seq + HT-SELEX + Methyl-HT-SELEX |
| Aligned words | 920 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 2 (14) | 0.894 | 0.966 | 0.88 | 0.951 | 0.888 | 0.949 | 5.268 | 6.587 | 333.758 | 897.62 |
| Mouse | 2 (14) | 0.989 | 0.99 | 0.985 | 0.987 | 0.985 | 0.988 | 7.874 | 8.004 | 704.22 | 873.013 |
| HT-SELEX benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
|---|---|---|---|---|---|---|---|
| Overall, 6 experiments | median | 0.985 | 0.977 | 0.932 | 0.929 | 0.791 | 0.805 |
| best | 1.0 | 1.0 | 0.958 | 0.946 | 0.894 | 0.874 | |
| Methyl HT-SELEX, 2 experiments | median | 0.964 | 0.95 | 0.897 | 0.879 | 0.787 | 0.782 |
| best | 0.987 | 0.982 | 0.953 | 0.94 | 0.857 | 0.847 | |
| Non-Methyl HT-SELEX, 4 experiments | median | 0.986 | 0.978 | 0.935 | 0.93 | 0.791 | 0.806 |
| best | 1.0 | 1.0 | 0.958 | 0.946 | 0.894 | 0.874 | |
| rSNP benchmarking, ADASTRA | odds-ratio | -log-Fisher's P | Pearson r | Kendall tau |
|---|---|---|---|---|
| # | 14.944 | 11.258 | 0.327 | 0.184 |
| rSNP benchmarking, SNP-SELEX | auROC | auPRC | Pearson r | Kendall tau |
|---|---|---|---|---|
| batch 1 | 0.89 | 0.467 | 0.887 | 0.554 |
| batch 2 | 0.674 | 0.424 | 0.724 | 0.528 |
| TF superclass | Basic domains {1} (TFClass) |
| TF class | Basic leucine zipper factors (bZIP) {1.1} (TFClass) |
| TF family | Maf-related {1.1.3} (TFClass) |
| TF subfamily | Small MAF {1.1.3.2} (TFClass) |
| TFClass ID | TFClass: 1.1.3.2.2 |
| HGNC | HGNC:6781 |
| MGI | MGI:96911 |
| EntrezGene (human) | GeneID:4097 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:17134 (SSTAR profile) |
| UniProt ID (human) | MAFG_HUMAN |
| UniProt ID (mouse) | MAFG_MOUSE |
| UniProt AC (human) | O15525 (TFClass) |
| UniProt AC (mouse) | O54790 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 2 human, 2 mouse |
| HT-SELEX | 4 |
| Methyl-HT-SELEX | 2 |
| PCM | MAFG.H12INVIVO.0.PSM.A.pcm |
| PWM | MAFG.H12INVIVO.0.PSM.A.pwm |
| PFM | MAFG.H12INVIVO.0.PSM.A.pfm |
| Alignment | MAFG.H12INVIVO.0.PSM.A.words.tsv |
| Threshold to P-value map | MAFG.H12INVIVO.0.PSM.A.thr |
| Motif in other formats | |
| JASPAR format | MAFG.H12INVIVO.0.PSM.A_jaspar_format.txt |
| MEME format | MAFG.H12INVIVO.0.PSM.A_meme_format.meme |
| Transfac format | MAFG.H12INVIVO.0.PSM.A_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 356.0 | 132.0 | 250.0 | 182.0 |
| 02 | 438.0 | 51.0 | 183.0 | 248.0 |
| 03 | 529.0 | 25.0 | 70.0 | 296.0 |
| 04 | 446.0 | 43.0 | 32.0 | 399.0 |
| 05 | 205.0 | 255.0 | 181.0 | 279.0 |
| 06 | 40.0 | 69.0 | 15.0 | 796.0 |
| 07 | 0.0 | 15.0 | 904.0 | 1.0 |
| 08 | 39.0 | 875.0 | 1.0 | 5.0 |
| 09 | 15.0 | 18.0 | 1.0 | 886.0 |
| 10 | 9.0 | 10.0 | 886.0 | 15.0 |
| 11 | 905.0 | 1.0 | 1.0 | 13.0 |
| 12 | 15.0 | 500.0 | 382.0 | 23.0 |
| 13 | 53.0 | 42.0 | 37.0 | 788.0 |
| 14 | 71.0 | 687.0 | 60.0 | 102.0 |
| 15 | 682.0 | 3.0 | 156.0 | 79.0 |
| 16 | 61.0 | 10.0 | 725.0 | 124.0 |
| 17 | 19.0 | 806.0 | 82.0 | 13.0 |
| 18 | 641.0 | 55.0 | 102.0 | 122.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.387 | 0.143 | 0.272 | 0.198 |
| 02 | 0.476 | 0.055 | 0.199 | 0.27 |
| 03 | 0.575 | 0.027 | 0.076 | 0.322 |
| 04 | 0.485 | 0.047 | 0.035 | 0.434 |
| 05 | 0.223 | 0.277 | 0.197 | 0.303 |
| 06 | 0.043 | 0.075 | 0.016 | 0.865 |
| 07 | 0.0 | 0.016 | 0.983 | 0.001 |
| 08 | 0.042 | 0.951 | 0.001 | 0.005 |
| 09 | 0.016 | 0.02 | 0.001 | 0.963 |
| 10 | 0.01 | 0.011 | 0.963 | 0.016 |
| 11 | 0.984 | 0.001 | 0.001 | 0.014 |
| 12 | 0.016 | 0.543 | 0.415 | 0.025 |
| 13 | 0.058 | 0.046 | 0.04 | 0.857 |
| 14 | 0.077 | 0.747 | 0.065 | 0.111 |
| 15 | 0.741 | 0.003 | 0.17 | 0.086 |
| 16 | 0.066 | 0.011 | 0.788 | 0.135 |
| 17 | 0.021 | 0.876 | 0.089 | 0.014 |
| 18 | 0.697 | 0.06 | 0.111 | 0.133 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.434 | -0.55 | 0.083 | -0.232 |
| 02 | 0.641 | -1.481 | -0.227 | 0.075 |
| 03 | 0.829 | -2.161 | -1.173 | 0.251 |
| 04 | 0.659 | -1.645 | -1.928 | 0.548 |
| 05 | -0.114 | 0.102 | -0.238 | 0.192 |
| 06 | -1.715 | -1.187 | -2.63 | 1.236 |
| 07 | -4.911 | -2.63 | 1.363 | -4.45 |
| 08 | -1.739 | 1.331 | -4.45 | -3.542 |
| 09 | -2.63 | -2.465 | -4.45 | 1.343 |
| 10 | -3.075 | -2.985 | 1.343 | -2.63 |
| 11 | 1.364 | -4.45 | -4.45 | -2.757 |
| 12 | -2.63 | 0.773 | 0.504 | -2.238 |
| 13 | -1.443 | -1.668 | -1.789 | 1.226 |
| 14 | -1.159 | 1.089 | -1.323 | -0.804 |
| 15 | 1.082 | -3.897 | -0.385 | -1.055 |
| 16 | -1.307 | -2.985 | 1.143 | -0.612 |
| 17 | -2.415 | 1.249 | -1.018 | -2.757 |
| 18 | 1.02 | -1.408 | -0.804 | -0.628 |
| P-value | Threshold |
|---|---|
| 0.001 | 1.41956 |
| 0.0005 | 2.74251 |
| 0.0001 | 5.53176 |