| Motif | MAFF.H12RSNP.0.PSM.A |
| Gene (human) | MAFF (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | Maff |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | A |
| Motif | MAFF.H12RSNP.0.PSM.A |
| Gene (human) | MAFF (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | Maff |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | A |
| Motif length | 22 |
| Consensus | dhhbWGCYKRSTCAGCWnhYYh |
| GC content | 44.31% |
| Information content (bits; total / per base) | 16.203 / 0.736 |
| Data sources | ChIP-Seq + HT-SELEX + Methyl-HT-SELEX |
| Aligned words | 979 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 2 (14) | 0.947 | 0.961 | 0.936 | 0.953 | 0.944 | 0.961 | 6.335 | 6.909 | 817.887 | 1000.796 |
| Mouse | 7 (48) | 0.926 | 0.953 | 0.909 | 0.939 | 0.923 | 0.947 | 6.21 | 7.411 | 313.514 | 672.824 |
| HT-SELEX benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
|---|---|---|---|---|---|---|---|
| Overall, 4 experiments | median | 0.978 | 0.973 | 0.898 | 0.896 | 0.779 | 0.791 |
| best | 0.999 | 0.999 | 0.996 | 0.995 | 0.945 | 0.942 | |
| Methyl HT-SELEX, 2 experiments | median | 0.978 | 0.973 | 0.898 | 0.896 | 0.779 | 0.791 |
| best | 0.998 | 0.998 | 0.985 | 0.982 | 0.885 | 0.888 | |
| Non-Methyl HT-SELEX, 2 experiments | median | 0.775 | 0.776 | 0.761 | 0.762 | 0.73 | 0.73 |
| best | 0.999 | 0.999 | 0.996 | 0.995 | 0.945 | 0.942 | |
| rSNP benchmarking, SNP-SELEX | auROC | auPRC | Pearson r | Kendall tau |
|---|---|---|---|---|
| batch 2 | 0.757 | 0.682 | 0.782 | 0.588 |
| TF superclass | Basic domains {1} (TFClass) |
| TF class | Basic leucine zipper factors (bZIP) {1.1} (TFClass) |
| TF family | Maf-related {1.1.3} (TFClass) |
| TF subfamily | Small MAF {1.1.3.2} (TFClass) |
| TFClass ID | TFClass: 1.1.3.2.1 |
| HGNC | HGNC:6780 |
| MGI | MGI:96910 |
| EntrezGene (human) | GeneID:23764 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:17133 (SSTAR profile) |
| UniProt ID (human) | MAFF_HUMAN |
| UniProt ID (mouse) | MAFF_MOUSE |
| UniProt AC (human) | Q9ULX9 (TFClass) |
| UniProt AC (mouse) | O54791 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 2 human, 7 mouse |
| HT-SELEX | 2 |
| Methyl-HT-SELEX | 2 |
| PCM | MAFF.H12RSNP.0.PSM.A.pcm |
| PWM | MAFF.H12RSNP.0.PSM.A.pwm |
| PFM | MAFF.H12RSNP.0.PSM.A.pfm |
| Alignment | MAFF.H12RSNP.0.PSM.A.words.tsv |
| Threshold to P-value map | MAFF.H12RSNP.0.PSM.A.thr |
| Motif in other formats | |
| JASPAR format | MAFF.H12RSNP.0.PSM.A_jaspar_format.txt |
| MEME format | MAFF.H12RSNP.0.PSM.A_meme_format.meme |
| Transfac format | MAFF.H12RSNP.0.PSM.A_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 309.0 | 130.0 | 154.0 | 386.0 |
| 02 | 320.0 | 119.0 | 81.0 | 459.0 |
| 03 | 236.0 | 159.0 | 108.0 | 476.0 |
| 04 | 116.0 | 332.0 | 145.0 | 386.0 |
| 05 | 100.0 | 73.0 | 74.0 | 732.0 |
| 06 | 26.0 | 81.0 | 845.0 | 27.0 |
| 07 | 52.0 | 831.0 | 19.0 | 77.0 |
| 08 | 78.0 | 130.0 | 17.0 | 754.0 |
| 09 | 102.0 | 58.0 | 675.0 | 144.0 |
| 10 | 742.0 | 48.0 | 95.0 | 94.0 |
| 11 | 53.0 | 435.0 | 441.0 | 50.0 |
| 12 | 34.0 | 36.0 | 16.0 | 893.0 |
| 13 | 58.0 | 850.0 | 31.0 | 40.0 |
| 14 | 852.0 | 8.0 | 59.0 | 60.0 |
| 15 | 12.0 | 27.0 | 828.0 | 112.0 |
| 16 | 5.0 | 915.0 | 30.0 | 29.0 |
| 17 | 716.0 | 25.0 | 82.0 | 156.0 |
| 18 | 175.0 | 256.0 | 183.0 | 365.0 |
| 19 | 195.0 | 126.0 | 89.0 | 569.0 |
| 20 | 119.0 | 178.0 | 45.0 | 637.0 |
| 21 | 81.0 | 262.0 | 65.0 | 571.0 |
| 22 | 145.0 | 267.0 | 116.0 | 451.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.316 | 0.133 | 0.157 | 0.394 |
| 02 | 0.327 | 0.122 | 0.083 | 0.469 |
| 03 | 0.241 | 0.162 | 0.11 | 0.486 |
| 04 | 0.118 | 0.339 | 0.148 | 0.394 |
| 05 | 0.102 | 0.075 | 0.076 | 0.748 |
| 06 | 0.027 | 0.083 | 0.863 | 0.028 |
| 07 | 0.053 | 0.849 | 0.019 | 0.079 |
| 08 | 0.08 | 0.133 | 0.017 | 0.77 |
| 09 | 0.104 | 0.059 | 0.689 | 0.147 |
| 10 | 0.758 | 0.049 | 0.097 | 0.096 |
| 11 | 0.054 | 0.444 | 0.45 | 0.051 |
| 12 | 0.035 | 0.037 | 0.016 | 0.912 |
| 13 | 0.059 | 0.868 | 0.032 | 0.041 |
| 14 | 0.87 | 0.008 | 0.06 | 0.061 |
| 15 | 0.012 | 0.028 | 0.846 | 0.114 |
| 16 | 0.005 | 0.935 | 0.031 | 0.03 |
| 17 | 0.731 | 0.026 | 0.084 | 0.159 |
| 18 | 0.179 | 0.261 | 0.187 | 0.373 |
| 19 | 0.199 | 0.129 | 0.091 | 0.581 |
| 20 | 0.122 | 0.182 | 0.046 | 0.651 |
| 21 | 0.083 | 0.268 | 0.066 | 0.583 |
| 22 | 0.148 | 0.273 | 0.118 | 0.461 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.232 | -0.627 | -0.459 | 0.453 |
| 02 | 0.266 | -0.714 | -1.092 | 0.626 |
| 03 | -0.036 | -0.428 | -0.809 | 0.662 |
| 04 | -0.739 | 0.303 | -0.519 | 0.453 |
| 05 | -0.885 | -1.193 | -1.18 | 1.091 |
| 06 | -2.185 | -1.092 | 1.234 | -2.15 |
| 07 | -1.523 | 1.217 | -2.476 | -1.141 |
| 08 | -1.129 | -0.627 | -2.578 | 1.12 |
| 09 | -0.866 | -1.418 | 1.01 | -0.526 |
| 10 | 1.104 | -1.601 | -0.935 | -0.946 |
| 11 | -1.505 | 0.572 | 0.586 | -1.561 |
| 12 | -1.931 | -1.877 | -2.632 | 1.289 |
| 13 | -1.418 | 1.24 | -2.019 | -1.776 |
| 14 | 1.242 | -3.233 | -1.401 | -1.385 |
| 15 | -2.888 | -2.15 | 1.214 | -0.773 |
| 16 | -3.602 | 1.314 | -2.05 | -2.082 |
| 17 | 1.069 | -2.222 | -1.08 | -0.446 |
| 18 | -0.333 | 0.045 | -0.288 | 0.397 |
| 19 | -0.225 | -0.657 | -0.999 | 0.84 |
| 20 | -0.714 | -0.316 | -1.663 | 0.952 |
| 21 | -1.092 | 0.068 | -1.307 | 0.843 |
| 22 | -0.519 | 0.086 | -0.739 | 0.608 |
| P-value | Threshold |
|---|---|
| 0.001 | 3.01856 |
| 0.0005 | 4.08341 |
| 0.0001 | 6.35206 |