| Motif | MAFF.H12INVIVO.0.PSM.A |
| Gene (human) | MAFF (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | Maff |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | A |
| Motif | MAFF.H12INVIVO.0.PSM.A |
| Gene (human) | MAFF (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | Maff |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | A |
| Motif length | 22 |
| Consensus | dhhhKGCYKRSTCAGCWnWYYh |
| GC content | 43.66% |
| Information content (bits; total / per base) | 17.272 / 0.785 |
| Data sources | ChIP-Seq + HT-SELEX + Methyl-HT-SELEX |
| Aligned words | 927 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 2 (14) | 0.961 | 0.972 | 0.949 | 0.963 | 0.956 | 0.97 | 6.549 | 7.122 | 850.256 | 1020.367 |
| Mouse | 7 (48) | 0.931 | 0.961 | 0.915 | 0.948 | 0.926 | 0.954 | 6.297 | 7.524 | 332.663 | 686.367 |
| HT-SELEX benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
|---|---|---|---|---|---|---|---|
| Overall, 4 experiments | median | 0.982 | 0.978 | 0.906 | 0.904 | 0.788 | 0.8 |
| best | 0.999 | 0.999 | 0.997 | 0.996 | 0.957 | 0.954 | |
| Methyl HT-SELEX, 2 experiments | median | 0.982 | 0.978 | 0.906 | 0.904 | 0.788 | 0.8 |
| best | 0.999 | 0.998 | 0.989 | 0.986 | 0.898 | 0.899 | |
| Non-Methyl HT-SELEX, 2 experiments | median | 0.778 | 0.779 | 0.764 | 0.764 | 0.737 | 0.737 |
| best | 0.999 | 0.999 | 0.997 | 0.996 | 0.957 | 0.954 | |
| rSNP benchmarking, SNP-SELEX | auROC | auPRC | Pearson r | Kendall tau |
|---|---|---|---|---|
| batch 2 | 0.791 | 0.697 | 0.771 | 0.59 |
| TF superclass | Basic domains {1} (TFClass) |
| TF class | Basic leucine zipper factors (bZIP) {1.1} (TFClass) |
| TF family | Maf-related {1.1.3} (TFClass) |
| TF subfamily | Small MAF {1.1.3.2} (TFClass) |
| TFClass ID | TFClass: 1.1.3.2.1 |
| HGNC | HGNC:6780 |
| MGI | MGI:96910 |
| EntrezGene (human) | GeneID:23764 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:17133 (SSTAR profile) |
| UniProt ID (human) | MAFF_HUMAN |
| UniProt ID (mouse) | MAFF_MOUSE |
| UniProt AC (human) | Q9ULX9 (TFClass) |
| UniProt AC (mouse) | O54791 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 2 human, 7 mouse |
| HT-SELEX | 2 |
| Methyl-HT-SELEX | 2 |
| PCM | MAFF.H12INVIVO.0.PSM.A.pcm |
| PWM | MAFF.H12INVIVO.0.PSM.A.pwm |
| PFM | MAFF.H12INVIVO.0.PSM.A.pfm |
| Alignment | MAFF.H12INVIVO.0.PSM.A.words.tsv |
| Threshold to P-value map | MAFF.H12INVIVO.0.PSM.A.thr |
| Motif in other formats | |
| JASPAR format | MAFF.H12INVIVO.0.PSM.A_jaspar_format.txt |
| MEME format | MAFF.H12INVIVO.0.PSM.A_meme_format.meme |
| Transfac format | MAFF.H12INVIVO.0.PSM.A_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 343.0 | 125.0 | 141.0 | 318.0 |
| 02 | 358.0 | 100.0 | 68.0 | 401.0 |
| 03 | 249.0 | 117.0 | 106.0 | 455.0 |
| 04 | 159.0 | 260.0 | 143.0 | 365.0 |
| 05 | 75.0 | 74.0 | 78.0 | 700.0 |
| 06 | 26.0 | 81.0 | 791.0 | 29.0 |
| 07 | 59.0 | 790.0 | 22.0 | 56.0 |
| 08 | 104.0 | 126.0 | 27.0 | 670.0 |
| 09 | 115.0 | 59.0 | 632.0 | 121.0 |
| 10 | 707.0 | 46.0 | 103.0 | 71.0 |
| 11 | 53.0 | 341.0 | 506.0 | 27.0 |
| 12 | 13.0 | 6.0 | 14.0 | 894.0 |
| 13 | 40.0 | 866.0 | 13.0 | 8.0 |
| 14 | 891.0 | 2.0 | 21.0 | 13.0 |
| 15 | 5.0 | 12.0 | 792.0 | 118.0 |
| 16 | 6.0 | 861.0 | 34.0 | 26.0 |
| 17 | 721.0 | 35.0 | 72.0 | 99.0 |
| 18 | 184.0 | 240.0 | 177.0 | 326.0 |
| 19 | 181.0 | 82.0 | 84.0 | 580.0 |
| 20 | 142.0 | 150.0 | 51.0 | 584.0 |
| 21 | 111.0 | 253.0 | 45.0 | 518.0 |
| 22 | 143.0 | 241.0 | 117.0 | 426.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.37 | 0.135 | 0.152 | 0.343 |
| 02 | 0.386 | 0.108 | 0.073 | 0.433 |
| 03 | 0.269 | 0.126 | 0.114 | 0.491 |
| 04 | 0.172 | 0.28 | 0.154 | 0.394 |
| 05 | 0.081 | 0.08 | 0.084 | 0.755 |
| 06 | 0.028 | 0.087 | 0.853 | 0.031 |
| 07 | 0.064 | 0.852 | 0.024 | 0.06 |
| 08 | 0.112 | 0.136 | 0.029 | 0.723 |
| 09 | 0.124 | 0.064 | 0.682 | 0.131 |
| 10 | 0.763 | 0.05 | 0.111 | 0.077 |
| 11 | 0.057 | 0.368 | 0.546 | 0.029 |
| 12 | 0.014 | 0.006 | 0.015 | 0.964 |
| 13 | 0.043 | 0.934 | 0.014 | 0.009 |
| 14 | 0.961 | 0.002 | 0.023 | 0.014 |
| 15 | 0.005 | 0.013 | 0.854 | 0.127 |
| 16 | 0.006 | 0.929 | 0.037 | 0.028 |
| 17 | 0.778 | 0.038 | 0.078 | 0.107 |
| 18 | 0.198 | 0.259 | 0.191 | 0.352 |
| 19 | 0.195 | 0.088 | 0.091 | 0.626 |
| 20 | 0.153 | 0.162 | 0.055 | 0.63 |
| 21 | 0.12 | 0.273 | 0.049 | 0.559 |
| 22 | 0.154 | 0.26 | 0.126 | 0.46 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.39 | -0.611 | -0.492 | 0.314 |
| 02 | 0.432 | -0.831 | -1.209 | 0.545 |
| 03 | 0.071 | -0.676 | -0.774 | 0.671 |
| 04 | -0.373 | 0.114 | -0.478 | 0.452 |
| 05 | -1.113 | -1.126 | -1.075 | 1.101 |
| 06 | -2.131 | -1.038 | 1.222 | -2.028 |
| 07 | -1.347 | 1.221 | -2.287 | -1.398 |
| 08 | -0.792 | -0.603 | -2.096 | 1.057 |
| 09 | -0.693 | -1.347 | 0.999 | -0.643 |
| 10 | 1.11 | -1.588 | -0.802 | -1.167 |
| 11 | -1.451 | 0.384 | 0.777 | -2.096 |
| 12 | -2.765 | -3.411 | -2.699 | 1.345 |
| 13 | -1.722 | 1.313 | -2.765 | -3.18 |
| 14 | 1.341 | -4.143 | -2.33 | -2.765 |
| 15 | -3.55 | -2.835 | 1.224 | -0.668 |
| 16 | -3.411 | 1.307 | -1.878 | -2.131 |
| 17 | 1.13 | -1.85 | -1.153 | -0.841 |
| 18 | -0.229 | 0.035 | -0.267 | 0.339 |
| 19 | -0.245 | -1.026 | -1.002 | 0.913 |
| 20 | -0.485 | -0.431 | -1.488 | 0.92 |
| 21 | -0.728 | 0.087 | -1.609 | 0.8 |
| 22 | -0.478 | 0.039 | -0.676 | 0.605 |
| P-value | Threshold |
|---|---|
| 0.001 | 2.46096 |
| 0.0005 | 3.61511 |
| 0.0001 | 6.06321 |