| Motif | MAFB.H12RSNP.1.P.B |
| Gene (human) | MAFB (GeneCards) |
| Gene synonyms (human) | KRML |
| Gene (mouse) | Mafb |
| Gene synonyms (mouse) | Krml, Maf1 |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 1 |
| Quality | B |
| Motif | MAFB.H12RSNP.1.P.B |
| Gene (human) | MAFB (GeneCards) |
| Gene synonyms (human) | KRML |
| Gene (mouse) | Mafb |
| Gene synonyms (mouse) | Krml, Maf1 |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 1 |
| Quality | B |
| Motif length | 10 |
| Consensus | hnTGCTGAbh |
| GC content | 47.46% |
| Information content (bits; total / per base) | 8.48 / 0.848 |
| Data sources | ChIP-Seq |
| Aligned words | 1000 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Mouse | 3 (16) | 0.862 | 0.883 | 0.767 | 0.793 | 0.822 | 0.84 | 2.614 | 2.737 | 242.359 | 371.42 |
| HT-SELEX benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
|---|---|---|---|---|---|---|---|
| Non-Methyl HT-SELEX, 2 experiments | median | 0.92 | 0.911 | 0.843 | 0.841 | 0.74 | 0.753 |
| best | 0.996 | 0.994 | 0.99 | 0.985 | 0.878 | 0.886 | |
| rSNP benchmarking, SNP-SELEX | auROC | auPRC | Pearson r | Kendall tau |
|---|---|---|---|---|
| batch 2 | 0.559 | 0.014 | 0.383 | 0.314 |
| TF superclass | Basic domains {1} (TFClass) |
| TF class | Basic leucine zipper factors (bZIP) {1.1} (TFClass) |
| TF family | Maf-related {1.1.3} (TFClass) |
| TF subfamily | Large MAF {1.1.3.1} (TFClass) |
| TFClass ID | TFClass: 1.1.3.1.3 |
| HGNC | HGNC:6408 |
| MGI | MGI:104555 |
| EntrezGene (human) | GeneID:9935 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:16658 (SSTAR profile) |
| UniProt ID (human) | MAFB_HUMAN |
| UniProt ID (mouse) | MAFB_MOUSE |
| UniProt AC (human) | Q9Y5Q3 (TFClass) |
| UniProt AC (mouse) | P54841 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 0 human, 3 mouse |
| HT-SELEX | 2 |
| Methyl-HT-SELEX | 0 |
| PCM | MAFB.H12RSNP.1.P.B.pcm |
| PWM | MAFB.H12RSNP.1.P.B.pwm |
| PFM | MAFB.H12RSNP.1.P.B.pfm |
| Alignment | MAFB.H12RSNP.1.P.B.words.tsv |
| Threshold to P-value map | MAFB.H12RSNP.1.P.B.thr |
| Motif in other formats | |
| JASPAR format | MAFB.H12RSNP.1.P.B_jaspar_format.txt |
| MEME format | MAFB.H12RSNP.1.P.B_meme_format.meme |
| Transfac format | MAFB.H12RSNP.1.P.B_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 363.0 | 154.0 | 153.0 | 330.0 |
| 02 | 197.0 | 310.0 | 192.0 | 301.0 |
| 03 | 88.0 | 24.0 | 40.0 | 848.0 |
| 04 | 12.0 | 49.0 | 889.0 | 50.0 |
| 05 | 47.0 | 906.0 | 18.0 | 29.0 |
| 06 | 53.0 | 3.0 | 0.0 | 944.0 |
| 07 | 29.0 | 41.0 | 832.0 | 98.0 |
| 08 | 816.0 | 33.0 | 51.0 | 100.0 |
| 09 | 97.0 | 482.0 | 305.0 | 116.0 |
| 10 | 202.0 | 159.0 | 105.0 | 534.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.363 | 0.154 | 0.153 | 0.33 |
| 02 | 0.197 | 0.31 | 0.192 | 0.301 |
| 03 | 0.088 | 0.024 | 0.04 | 0.848 |
| 04 | 0.012 | 0.049 | 0.889 | 0.05 |
| 05 | 0.047 | 0.906 | 0.018 | 0.029 |
| 06 | 0.053 | 0.003 | 0.0 | 0.944 |
| 07 | 0.029 | 0.041 | 0.832 | 0.098 |
| 08 | 0.816 | 0.033 | 0.051 | 0.1 |
| 09 | 0.097 | 0.482 | 0.305 | 0.116 |
| 10 | 0.202 | 0.159 | 0.105 | 0.534 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.371 | -0.48 | -0.487 | 0.276 |
| 02 | -0.236 | 0.214 | -0.262 | 0.184 |
| 03 | -1.032 | -2.281 | -1.797 | 1.217 |
| 04 | -2.909 | -1.602 | 1.264 | -1.582 |
| 05 | -1.642 | 1.283 | -2.546 | -2.103 |
| 06 | -1.526 | -3.975 | -4.982 | 1.324 |
| 07 | -2.103 | -1.774 | 1.198 | -0.926 |
| 08 | 1.178 | -1.981 | -1.563 | -0.906 |
| 09 | -0.936 | 0.653 | 0.198 | -0.76 |
| 10 | -0.212 | -0.449 | -0.858 | 0.755 |
| P-value | Threshold |
|---|---|
| 0.001 | 4.978905 |
| 0.0005 | 5.666995 |
| 0.0001 | 7.242895 |