| Motif | KMT2B.H12INVIVO.0.P.B |
| Gene (human) | KMT2B (GeneCards) |
| Gene synonyms (human) | HRX2, KIAA0304, MLL2, MLL4, TRX2, WBP7 |
| Gene (mouse) | Kmt2b |
| Gene synonyms (mouse) | Mll2, Trx2, Wbp7 |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | B |
| Motif | KMT2B.H12INVIVO.0.P.B |
| Gene (human) | KMT2B (GeneCards) |
| Gene synonyms (human) | HRX2, KIAA0304, MLL2, MLL4, TRX2, WBP7 |
| Gene (mouse) | Kmt2b |
| Gene synonyms (mouse) | Mll2, Trx2, Wbp7 |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | B |
| Motif length | 8 |
| Consensus | GCGGCGGC |
| GC content | 96.36% |
| Information content (bits; total / per base) | 13.976 / 1.747 |
| Data sources | ChIP-Seq |
| Aligned words | 998 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Mouse | 15 (102) | 0.811 | 0.878 | 0.608 | 0.733 | 0.593 | 0.729 | 1.174 | 1.505 | 8.097 | 26.699 |
| TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
| TF class | CXXC zinc finger factors {2.6} (TFClass) |
| TF family | CpG-binding {2.6.1} (TFClass) |
| TF subfamily | {2.6.1.0} (TFClass) |
| TFClass ID | TFClass: 2.6.1.0.7 |
| HGNC | HGNC:15840 |
| MGI | MGI:109565 |
| EntrezGene (human) | GeneID:9757 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:75410 (SSTAR profile) |
| UniProt ID (human) | KMT2B_HUMAN |
| UniProt ID (mouse) | KMT2B_MOUSE |
| UniProt AC (human) | Q9UMN6 (TFClass) |
| UniProt AC (mouse) | O08550 (TFClass) |
| GRECO-DB-TF | no |
| ChIP-Seq | 0 human, 15 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 0 |
| PCM | KMT2B.H12INVIVO.0.P.B.pcm |
| PWM | KMT2B.H12INVIVO.0.P.B.pwm |
| PFM | KMT2B.H12INVIVO.0.P.B.pfm |
| Alignment | KMT2B.H12INVIVO.0.P.B.words.tsv |
| Threshold to P-value map | KMT2B.H12INVIVO.0.P.B.thr |
| Motif in other formats | |
| JASPAR format | KMT2B.H12INVIVO.0.P.B_jaspar_format.txt |
| MEME format | KMT2B.H12INVIVO.0.P.B_meme_format.meme |
| Transfac format | KMT2B.H12INVIVO.0.P.B_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 2.0 | 0.0 | 984.0 | 12.0 |
| 02 | 43.0 | 950.0 | 0.0 | 5.0 |
| 03 | 7.0 | 1.0 | 938.0 | 52.0 |
| 04 | 4.0 | 3.0 | 987.0 | 4.0 |
| 05 | 29.0 | 957.0 | 1.0 | 11.0 |
| 06 | 17.0 | 4.0 | 897.0 | 80.0 |
| 07 | 4.0 | 4.0 | 987.0 | 3.0 |
| 08 | 14.0 | 976.0 | 4.0 | 4.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.002 | 0.0 | 0.986 | 0.012 |
| 02 | 0.043 | 0.952 | 0.0 | 0.005 |
| 03 | 0.007 | 0.001 | 0.94 | 0.052 |
| 04 | 0.004 | 0.003 | 0.989 | 0.004 |
| 05 | 0.029 | 0.959 | 0.001 | 0.011 |
| 06 | 0.017 | 0.004 | 0.899 | 0.08 |
| 07 | 0.004 | 0.004 | 0.989 | 0.003 |
| 08 | 0.014 | 0.978 | 0.004 | 0.004 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -4.211 | -4.98 | 1.367 | -2.907 |
| 02 | -1.726 | 1.332 | -4.98 | -3.62 |
| 03 | -3.36 | -4.523 | 1.319 | -1.542 |
| 04 | -3.781 | -3.973 | 1.37 | -3.781 |
| 05 | -2.101 | 1.339 | -4.523 | -2.983 |
| 06 | -2.596 | -3.781 | 1.275 | -1.123 |
| 07 | -3.781 | -3.781 | 1.37 | -3.973 |
| 08 | -2.771 | 1.359 | -3.781 | -3.781 |
| P-value | Threshold |
|---|---|
| 0.001 | 2.67379 |
| 0.0005 | 4.0455 |
| 0.0001 | 6.54965 |