MotifKLF9.H12INVITRO.1.P.D
Gene (human)KLF9
(GeneCards)
Gene synonyms (human)BTEB, BTEB1
Gene (mouse)Klf9
Gene synonyms (mouse)Bteb, Bteb-1, Bteb1
LOGO
LOGO (reverse complement)
Motif subtype1
Quality
D
Motif length23
ConsensusSvvRKGGGCGGGGMbbSSSvSSS
GC content82.84%
Information content (bits; total / per base)20.437 / 0.889
Data sourcesChIP-Seq
Aligned words1000

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 5 (32) 0.769 0.855 0.614 0.723 0.818 0.951 3.996 5.091 95.231 267.77

rSNP benchmarking, ADASTRA odds-ratio -log-Fisher's P Pearson r Kendall tau
# 2.245 1.463 0.083 0.037
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyThree-zinc finger Kruppel-related {2.3.1} (TFClass)
TF subfamilyKr-like {2.3.1.2} (TFClass)
TFClass IDTFClass: 2.3.1.2.9
HGNCHGNC:1123
MGIMGI:1333856
EntrezGene (human)GeneID:687
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)KLF9_HUMAN
UniProt ID (mouse)KLF9_MOUSE
UniProt AC (human)Q13886
(TFClass)
UniProt AC (mouse)O35739
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 5 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0196.0169.0643.092.0
02175.0225.0491.0109.0
03377.0163.0328.0132.0
04119.063.0792.026.0
0561.09.0763.0167.0
0677.08.0909.06.0
075.09.0978.08.0
087.07.0984.02.0
0960.0862.02.076.0
109.03.0976.012.0
111.020.0754.0225.0
1221.011.0959.09.0
1322.022.0927.029.0
1492.0804.062.042.0
1589.25468.25300.25142.25
16121.0143.0527.0209.0
17116.0144.0641.099.0
1895.0191.0675.039.0
19174.0199.0584.043.0
20125.0236.0567.072.0
21104.0168.0639.089.0
22102.0189.0609.0100.0
23134.0153.0677.036.0
PFM
ACGT
010.0960.1690.6430.092
020.1750.2250.4910.109
030.3770.1630.3280.132
040.1190.0630.7920.026
050.0610.0090.7630.167
060.0770.0080.9090.006
070.0050.0090.9780.008
080.0070.0070.9840.002
090.060.8620.0020.076
100.0090.0030.9760.012
110.0010.020.7540.225
120.0210.0110.9590.009
130.0220.0220.9270.029
140.0920.8040.0620.042
150.0890.4680.30.142
160.1210.1430.5270.209
170.1160.1440.6410.099
180.0950.1910.6750.039
190.1740.1990.5840.043
200.1250.2360.5670.072
210.1040.1680.6390.089
220.1020.1890.6090.1
230.1340.1530.6770.036
PWM
ACGT
01-0.946-0.3880.94-0.988
02-0.354-0.1050.672-0.821
030.408-0.4240.27-0.633
04-0.735-1.3581.148-2.206
05-1.39-3.1561.111-0.4
06-1.162-3.2531.286-3.484
07-3.622-3.1561.359-3.253
08-3.362-3.3621.365-4.213
09-1.4061.233-4.213-1.175
10-3.156-3.9751.357-2.909
11-4.525-2.451.099-0.105
12-2.405-2.9851.339-3.156
13-2.362-2.3621.305-2.103
14-0.9881.163-1.374-1.75
15-1.0180.6240.182-0.559
16-0.718-0.5530.742-0.178
17-0.76-0.5470.937-0.916
18-0.956-0.2670.989-1.821
19-0.359-0.2260.845-1.728
20-0.686-0.0570.815-1.228
21-0.867-0.3940.934-1.02
22-0.887-0.2780.886-0.906
23-0.618-0.4870.992-1.898
Standard thresholds
P-value Threshold
0.001 0.72301
0.0005 2.07086
0.0001 4.93046