MotifKLF9.H12INVITRO.0.P.D
Gene (human)KLF9
(GeneCards)
Gene synonyms (human)BTEB, BTEB1
Gene (mouse)Klf9
Gene synonyms (mouse)Bteb, Bteb-1, Bteb1
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length14
ConsensusvdGKGGGYGKGKYh
GC content75.04%
Information content (bits; total / per base)14.869 / 1.062
Data sourcesChIP-Seq
Aligned words994

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 5 (32) 0.88 0.963 0.805 0.904 0.888 0.978 4.224 5.166 181.253 632.538

rSNP benchmarking, ADASTRA odds-ratio -log-Fisher's P Pearson r Kendall tau
# 4.584 3.546 0.137 0.059
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyThree-zinc finger Kruppel-related {2.3.1} (TFClass)
TF subfamilyKr-like {2.3.1.2} (TFClass)
TFClass IDTFClass: 2.3.1.2.9
HGNCHGNC:1123
MGIMGI:1333856
EntrezGene (human)GeneID:687
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)KLF9_HUMAN
UniProt ID (mouse)KLF9_MOUSE
UniProt AC (human)Q13886
(TFClass)
UniProt AC (mouse)O35739
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 5 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01287.0163.0419.0125.0
02481.065.0318.0130.0
03169.024.0777.024.0
0448.01.0586.0359.0
0523.00.0966.05.0
066.01.0978.09.0
0710.010.0972.02.0
0834.0647.03.0310.0
0915.04.0964.011.0
107.09.0344.0634.0
1118.03.0957.016.0
1263.070.0685.0176.0
1342.0785.073.094.0
14154.0467.0151.0222.0
PFM
ACGT
010.2890.1640.4220.126
020.4840.0650.320.131
030.170.0240.7820.024
040.0480.0010.590.361
050.0230.00.9720.005
060.0060.0010.9840.009
070.010.010.9780.002
080.0340.6510.0030.312
090.0150.0040.970.011
100.0070.0090.3460.638
110.0180.0030.9630.016
120.0630.070.6890.177
130.0420.790.0730.095
140.1550.470.1520.223
PWM
ACGT
010.143-0.4180.52-0.68
020.657-1.3220.245-0.642
03-0.382-2.2751.135-2.275
04-1.616-4.520.8540.366
05-2.315-4.9771.353-3.616
06-3.478-4.521.365-3.15
07-3.061-3.0611.359-4.207
08-1.9460.953-3.9690.22
09-2.705-3.7771.351-2.979
10-3.356-3.150.3230.932
11-2.54-3.9691.343-2.647
12-1.352-1.251.01-0.342
13-1.7441.146-1.209-0.961
14-0.4740.628-0.494-0.112
Standard thresholds
P-value Threshold
0.001 2.80651
0.0005 4.03276
0.0001 6.57711