MotifKLF8.H12INVIVO.1.P.C
Gene (human)KLF8
(GeneCards)
Gene synonyms (human)BKLF3, ZNF741
Gene (mouse)Klf8
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype1
Quality
C
Motif length23
ConsensusvRGGGMGGGGvndRRvRdRRvvR
GC content72.51%
Information content (bits; total / per base)16.069 / 0.699
Data sourcesChIP-Seq
Aligned words998

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (7) 0.696 0.707 0.479 0.487 0.833 0.852 3.223 3.44 6.444 10.215
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyThree-zinc finger Kruppel-related {2.3.1} (TFClass)
TF subfamilyKr-like {2.3.1.2} (TFClass)
TFClass IDTFClass: 2.3.1.2.8
HGNCHGNC:6351
MGIMGI:2442430
EntrezGene (human)GeneID:11279
(SSTAR profile)
EntrezGene (mouse)GeneID:245671
(SSTAR profile)
UniProt ID (human)KLF8_HUMAN
UniProt ID (mouse)KLF8_MOUSE
UniProt AC (human)O95600
(TFClass)
UniProt AC (mouse)Q8BLM0
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01257.0114.0535.092.0
02237.024.0546.0191.0
03188.09.0787.014.0
0430.04.0939.025.0
0524.012.0958.04.0
06284.0553.02.0159.0
0730.011.0932.025.0
0840.07.0786.0165.0
09209.011.0750.028.0
10138.09.0802.049.0
11202.0546.0205.045.0
12254.0267.0273.0204.0
13174.0117.0578.0129.0
14217.048.0651.082.0
15273.047.0633.045.0
16321.092.0503.082.0
17134.0125.0688.051.0
18264.0112.0436.0186.0
19177.078.0652.091.0
20177.066.0663.092.0
21259.0126.0553.060.0
22253.0125.0496.0124.0
23154.0102.0670.072.0
PFM
ACGT
010.2580.1140.5360.092
020.2370.0240.5470.191
030.1880.0090.7890.014
040.030.0040.9410.025
050.0240.0120.960.004
060.2850.5540.0020.159
070.030.0110.9340.025
080.040.0070.7880.165
090.2090.0110.7520.028
100.1380.0090.8040.049
110.2020.5470.2050.045
120.2550.2680.2740.204
130.1740.1170.5790.129
140.2170.0480.6520.082
150.2740.0470.6340.045
160.3220.0920.5040.082
170.1340.1250.6890.051
180.2650.1120.4370.186
190.1770.0780.6530.091
200.1770.0660.6640.092
210.260.1260.5540.06
220.2540.1250.4970.124
230.1540.1020.6710.072
PWM
ACGT
010.029-0.7750.759-0.986
02-0.051-2.2790.779-0.265
03-0.281-3.1541.144-2.771
04-2.069-3.7811.32-2.241
05-2.279-2.9071.34-3.781
060.1290.792-4.211-0.447
07-2.069-2.9831.313-2.241
08-1.795-3.361.143-0.41
09-0.176-2.9831.096-2.134
10-0.587-3.1541.163-1.6
11-0.210.779-0.195-1.682
120.0180.0670.089-0.2
13-0.357-0.750.836-0.653
14-0.139-1.620.955-1.099
150.089-1.640.927-1.682
160.25-0.9860.698-1.099
17-0.616-0.6841.01-1.561
180.056-0.7930.555-0.291
19-0.34-1.1480.956-0.997
20-0.34-1.3110.973-0.986
210.037-0.6760.792-1.404
220.014-0.6840.684-0.692
23-0.478-0.8850.983-1.226
Standard thresholds
P-value Threshold
0.001 2.92856
0.0005 4.04031
0.0001 6.38336