MotifKLF2.H12INVIVO.0.S.D
Gene (human)KLF2
(GeneCards)
Gene synonyms (human)LKLF
Gene (mouse)Klf2
Gene synonyms (mouse)Lklf
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length11
ConsensusddGGGCGTKdn
GC content70.5%
Information content (bits; total / per base)11.758 / 1.069
Data sourcesHT-SELEX
Aligned words9500

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Non-Methyl HT-SELEX, 1 experiments median 0.938 0.902 0.9 0.859 0.827 0.793
best 0.938 0.902 0.9 0.859 0.827 0.793
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyThree-zinc finger Kruppel-related {2.3.1} (TFClass)
TF subfamilyKr-like {2.3.1.2} (TFClass)
TFClass IDTFClass: 2.3.1.2.2
HGNCHGNC:6347
MGIMGI:1342772
EntrezGene (human)GeneID:10365
(SSTAR profile)
EntrezGene (mouse)GeneID:16598
(SSTAR profile)
UniProt ID (human)KLF2_HUMAN
UniProt ID (mouse)KLF2_MOUSE
UniProt AC (human)Q9Y5W3
(TFClass)
UniProt AC (mouse)Q60843
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 0 human, 0 mouse
HT-SELEX 1
Methyl-HT-SELEX 0
PCM
ACGT
012357.01235.03776.02132.0
023106.25462.252157.253774.25
03534.00.08942.024.0
040.075.09423.02.0
050.00.09499.01.0
0625.08172.00.01303.0
070.00.09500.00.0
08228.0283.0701.08288.0
09996.0367.06757.01380.0
101173.251142.255460.251724.25
111219.253065.252657.252558.25
PFM
ACGT
010.2480.130.3970.224
020.3270.0490.2270.397
030.0560.00.9410.003
040.00.0080.9920.0
050.00.01.00.0
060.0030.860.00.137
070.00.01.00.0
080.0240.030.0740.872
090.1050.0390.7110.145
100.1240.120.5750.182
110.1280.3230.280.269
PWM
ACGT
01-0.008-0.6530.463-0.108
020.268-1.633-0.0960.463
03-1.489-6.9451.325-4.505
04-6.945-3.4261.377-6.317
05-6.945-6.9451.385-6.583
06-4.4671.235-6.945-0.6
07-6.945-6.9451.386-6.945
08-2.334-2.12-1.2181.249
09-0.868-1.8621.045-0.542
10-0.704-0.7310.832-0.32
11-0.6660.2550.1120.074
Standard thresholds
P-value Threshold
0.001 3.99624
0.0005 5.286265
0.0001 7.486845