| Motif | KLF2.H12INVITRO.0.S.C |
| Gene (human) | KLF2 (GeneCards) |
| Gene synonyms (human) | LKLF |
| Gene (mouse) | Klf2 |
| Gene synonyms (mouse) | Lklf |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | C |
| Motif | KLF2.H12INVITRO.0.S.C |
| Gene (human) | KLF2 (GeneCards) |
| Gene synonyms (human) | LKLF |
| Gene (mouse) | Klf2 |
| Gene synonyms (mouse) | Lklf |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | C |
| Motif length | 11 |
| Consensus | ddGGGCGTKdn |
| GC content | 70.5% |
| Information content (bits; total / per base) | 11.758 / 1.069 |
| Data sources | HT-SELEX |
| Aligned words | 9500 |
| HT-SELEX benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
|---|---|---|---|---|---|---|---|
| Non-Methyl HT-SELEX, 1 experiments | median | 0.938 | 0.902 | 0.9 | 0.859 | 0.827 | 0.793 |
| best | 0.938 | 0.902 | 0.9 | 0.859 | 0.827 | 0.793 | |
| TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
| TF class | C2H2 zinc finger factors {2.3} (TFClass) |
| TF family | Three-zinc finger Kruppel-related {2.3.1} (TFClass) |
| TF subfamily | Kr-like {2.3.1.2} (TFClass) |
| TFClass ID | TFClass: 2.3.1.2.2 |
| HGNC | HGNC:6347 |
| MGI | MGI:1342772 |
| EntrezGene (human) | GeneID:10365 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:16598 (SSTAR profile) |
| UniProt ID (human) | KLF2_HUMAN |
| UniProt ID (mouse) | KLF2_MOUSE |
| UniProt AC (human) | Q9Y5W3 (TFClass) |
| UniProt AC (mouse) | Q60843 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 0 human, 0 mouse |
| HT-SELEX | 1 |
| Methyl-HT-SELEX | 0 |
| PCM | KLF2.H12INVITRO.0.S.C.pcm |
| PWM | KLF2.H12INVITRO.0.S.C.pwm |
| PFM | KLF2.H12INVITRO.0.S.C.pfm |
| Alignment | KLF2.H12INVITRO.0.S.C.words.tsv |
| Threshold to P-value map | KLF2.H12INVITRO.0.S.C.thr |
| Motif in other formats | |
| JASPAR format | KLF2.H12INVITRO.0.S.C_jaspar_format.txt |
| MEME format | KLF2.H12INVITRO.0.S.C_meme_format.meme |
| Transfac format | KLF2.H12INVITRO.0.S.C_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 2357.0 | 1235.0 | 3776.0 | 2132.0 |
| 02 | 3106.25 | 462.25 | 2157.25 | 3774.25 |
| 03 | 534.0 | 0.0 | 8942.0 | 24.0 |
| 04 | 0.0 | 75.0 | 9423.0 | 2.0 |
| 05 | 0.0 | 0.0 | 9499.0 | 1.0 |
| 06 | 25.0 | 8172.0 | 0.0 | 1303.0 |
| 07 | 0.0 | 0.0 | 9500.0 | 0.0 |
| 08 | 228.0 | 283.0 | 701.0 | 8288.0 |
| 09 | 996.0 | 367.0 | 6757.0 | 1380.0 |
| 10 | 1173.25 | 1142.25 | 5460.25 | 1724.25 |
| 11 | 1219.25 | 3065.25 | 2657.25 | 2558.25 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.248 | 0.13 | 0.397 | 0.224 |
| 02 | 0.327 | 0.049 | 0.227 | 0.397 |
| 03 | 0.056 | 0.0 | 0.941 | 0.003 |
| 04 | 0.0 | 0.008 | 0.992 | 0.0 |
| 05 | 0.0 | 0.0 | 1.0 | 0.0 |
| 06 | 0.003 | 0.86 | 0.0 | 0.137 |
| 07 | 0.0 | 0.0 | 1.0 | 0.0 |
| 08 | 0.024 | 0.03 | 0.074 | 0.872 |
| 09 | 0.105 | 0.039 | 0.711 | 0.145 |
| 10 | 0.124 | 0.12 | 0.575 | 0.182 |
| 11 | 0.128 | 0.323 | 0.28 | 0.269 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.008 | -0.653 | 0.463 | -0.108 |
| 02 | 0.268 | -1.633 | -0.096 | 0.463 |
| 03 | -1.489 | -6.945 | 1.325 | -4.505 |
| 04 | -6.945 | -3.426 | 1.377 | -6.317 |
| 05 | -6.945 | -6.945 | 1.385 | -6.583 |
| 06 | -4.467 | 1.235 | -6.945 | -0.6 |
| 07 | -6.945 | -6.945 | 1.386 | -6.945 |
| 08 | -2.334 | -2.12 | -1.218 | 1.249 |
| 09 | -0.868 | -1.862 | 1.045 | -0.542 |
| 10 | -0.704 | -0.731 | 0.832 | -0.32 |
| 11 | -0.666 | 0.255 | 0.112 | 0.074 |
| P-value | Threshold |
|---|---|
| 0.001 | 3.99624 |
| 0.0005 | 5.286265 |
| 0.0001 | 7.486845 |