| Motif | KLF17.H12CORE.1.P.C |
| Gene (human) | KLF17 (GeneCards) |
| Gene synonyms (human) | ZNF393 |
| Gene (mouse) | Klf17 |
| Gene synonyms (mouse) | Gzf, Zfp393, Znf393 |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 1 |
| Quality | C |
| Motif | KLF17.H12CORE.1.P.C |
| Gene (human) | KLF17 (GeneCards) |
| Gene synonyms (human) | ZNF393 |
| Gene (mouse) | Klf17 |
| Gene synonyms (mouse) | Gzf, Zfp393, Znf393 |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 1 |
| Quality | C |
| Motif length | 11 |
| Consensus | dvRGGGWGRRR |
| GC content | 67.46% |
| Information content (bits; total / per base) | 10.449 / 0.95 |
| Data sources | ChIP-Seq |
| Aligned words | 1000 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 1 (6) | 0.63 | 0.637 | 0.442 | 0.451 | 0.727 | 0.74 | 2.076 | 2.145 | 0.708 | 1.347 |
| HT-SELEX benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
|---|---|---|---|---|---|---|---|
| Methyl HT-SELEX, 1 experiments | median | 0.866 | 0.805 | 0.806 | 0.752 | 0.721 | 0.689 |
| best | 0.866 | 0.805 | 0.806 | 0.752 | 0.721 | 0.689 | |
| TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
| TF class | C2H2 zinc finger factors {2.3} (TFClass) |
| TF family | Three-zinc finger Kruppel-related {2.3.1} (TFClass) |
| TF subfamily | Kr-like {2.3.1.2} (TFClass) |
| TFClass ID | TFClass: 2.3.1.2.17 |
| HGNC | HGNC:18830 |
| MGI | MGI:2181068 |
| EntrezGene (human) | GeneID:128209 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:75753 (SSTAR profile) |
| UniProt ID (human) | KLF17_HUMAN |
| UniProt ID (mouse) | KLF17_MOUSE |
| UniProt AC (human) | Q5JT82 (TFClass) |
| UniProt AC (mouse) | Q8CFA7 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 1 human, 0 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 1 |
| PCM | KLF17.H12CORE.1.P.C.pcm |
| PWM | KLF17.H12CORE.1.P.C.pwm |
| PFM | KLF17.H12CORE.1.P.C.pfm |
| Alignment | KLF17.H12CORE.1.P.C.words.tsv |
| Threshold to P-value map | KLF17.H12CORE.1.P.C.thr |
| Motif in other formats | |
| JASPAR format | KLF17.H12CORE.1.P.C_jaspar_format.txt |
| MEME format | KLF17.H12CORE.1.P.C_meme_format.meme |
| Transfac format | KLF17.H12CORE.1.P.C_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 244.0 | 45.0 | 431.0 | 280.0 |
| 02 | 187.0 | 184.0 | 563.0 | 66.0 |
| 03 | 667.0 | 49.0 | 181.0 | 103.0 |
| 04 | 67.0 | 4.0 | 910.0 | 19.0 |
| 05 | 21.0 | 11.0 | 934.0 | 34.0 |
| 06 | 34.0 | 25.0 | 930.0 | 11.0 |
| 07 | 745.0 | 63.0 | 5.0 | 187.0 |
| 08 | 60.0 | 6.0 | 911.0 | 23.0 |
| 09 | 121.0 | 15.0 | 759.0 | 105.0 |
| 10 | 258.0 | 41.0 | 658.0 | 43.0 |
| 11 | 201.0 | 38.0 | 658.0 | 103.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.244 | 0.045 | 0.431 | 0.28 |
| 02 | 0.187 | 0.184 | 0.563 | 0.066 |
| 03 | 0.667 | 0.049 | 0.181 | 0.103 |
| 04 | 0.067 | 0.004 | 0.91 | 0.019 |
| 05 | 0.021 | 0.011 | 0.934 | 0.034 |
| 06 | 0.034 | 0.025 | 0.93 | 0.011 |
| 07 | 0.745 | 0.063 | 0.005 | 0.187 |
| 08 | 0.06 | 0.006 | 0.911 | 0.023 |
| 09 | 0.121 | 0.015 | 0.759 | 0.105 |
| 10 | 0.258 | 0.041 | 0.658 | 0.043 |
| 11 | 0.201 | 0.038 | 0.658 | 0.103 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.024 | -1.684 | 0.542 | 0.113 |
| 02 | -0.288 | -0.304 | 0.808 | -1.313 |
| 03 | 0.977 | -1.602 | -0.32 | -0.877 |
| 04 | -1.298 | -3.783 | 1.287 | -2.497 |
| 05 | -2.405 | -2.985 | 1.313 | -1.952 |
| 06 | -1.952 | -2.243 | 1.309 | -2.985 |
| 07 | 1.087 | -1.358 | -3.622 | -0.288 |
| 08 | -1.406 | -3.484 | 1.288 | -2.32 |
| 09 | -0.718 | -2.711 | 1.106 | -0.858 |
| 10 | 0.031 | -1.774 | 0.963 | -1.728 |
| 11 | -0.216 | -1.846 | 0.963 | -0.877 |
| P-value | Threshold |
|---|---|
| 0.001 | 4.6137 |
| 0.0005 | 5.47541 |
| 0.0001 | 7.263625 |