MotifKLF16.H12INVIVO.1.P.B
Gene (human)KLF16
(GeneCards)
Gene synonyms (human)BTEB4, NSLP2
Gene (mouse)Klf16
Gene synonyms (mouse)Bteb4, Drrf
LOGO
LOGO (reverse complement)
Motif subtype1
Quality
B
Motif length23
ConsensusSvvRvvRRRGGMRGRGMnSRvRS
GC content76.31%
Information content (bits; total / per base)15.502 / 0.674
Data sourcesChIP-Seq
Aligned words999

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 2 (13) 0.635 0.682 0.433 0.449 0.681 0.834 2.459 3.335 0.149 2.0

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Overall, 3 experiments median 0.582 0.547 0.568 0.54 0.55 0.532
best 0.603 0.558 0.586 0.551 0.563 0.541
Methyl HT-SELEX, 1 experiments median 0.582 0.547 0.568 0.54 0.55 0.532
best 0.582 0.547 0.568 0.54 0.55 0.532
Non-Methyl HT-SELEX, 2 experiments median 0.558 0.534 0.548 0.529 0.534 0.522
best 0.603 0.558 0.586 0.551 0.563 0.541
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyThree-zinc finger Kruppel-related {2.3.1} (TFClass)
TF subfamilyKr-like {2.3.1.2} (TFClass)
TFClass IDTFClass: 2.3.1.2.16
HGNCHGNC:16857
MGIMGI:2153049
EntrezGene (human)GeneID:83855
(SSTAR profile)
EntrezGene (mouse)GeneID:118445
(SSTAR profile)
UniProt ID (human)KLF16_HUMAN
UniProt ID (mouse)KLF16_MOUSE
UniProt AC (human)Q9BXK1
(TFClass)
UniProt AC (mouse)P58334
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 2 human, 0 mouse
HT-SELEX 2
Methyl-HT-SELEX 1
PCM
ACGT
01137.0247.0566.049.0
02179.0263.0515.042.0
03198.0183.0503.0115.0
04113.090.0718.078.0
05163.0244.0540.052.0
06389.0183.0294.0133.0
07208.079.0658.054.0
08129.073.0773.024.0
09313.042.0598.046.0
1043.09.0929.018.0
1120.052.0916.011.0
12265.0646.011.077.0
13140.025.0782.052.0
1439.010.0917.033.0
15227.033.0702.037.0
1686.032.0850.031.0
17249.0573.0148.029.0
18219.0288.0306.0186.0
19122.0153.0606.0118.0
20192.0118.0654.035.0
21245.0224.0459.071.0
22262.090.0603.044.0
23114.0159.0670.056.0
PFM
ACGT
010.1370.2470.5670.049
020.1790.2630.5160.042
030.1980.1830.5040.115
040.1130.090.7190.078
050.1630.2440.5410.052
060.3890.1830.2940.133
070.2080.0790.6590.054
080.1290.0730.7740.024
090.3130.0420.5990.046
100.0430.0090.930.018
110.020.0520.9170.011
120.2650.6470.0110.077
130.140.0250.7830.052
140.0390.010.9180.033
150.2270.0330.7030.037
160.0860.0320.8510.031
170.2490.5740.1480.029
180.2190.2880.3060.186
190.1220.1530.6070.118
200.1920.1180.6550.035
210.2450.2240.4590.071
220.2620.090.6040.044
230.1140.1590.6710.056
PWM
ACGT
01-0.595-0.0110.814-1.601
02-0.330.0510.72-1.749
03-0.23-0.3080.697-0.768
04-0.785-1.0091.052-1.149
05-0.423-0.0230.767-1.543
060.441-0.3080.162-0.624
07-0.182-1.1360.964-1.507
08-0.654-1.2141.125-2.28
090.224-1.7490.869-1.662
10-1.727-3.1551.309-2.545
11-2.449-1.5431.295-2.984
120.0590.946-2.984-1.161
13-0.573-2.2421.137-1.543
14-1.82-3.0651.296-1.98
15-0.095-1.981.029-1.871
16-1.053-2.0091.22-2.039
17-0.0030.827-0.519-2.102
18-0.130.1420.202-0.292
19-0.709-0.4860.882-0.742
20-0.261-0.7420.958-1.924
21-0.019-0.1080.605-1.241
220.048-1.0090.877-1.705
23-0.776-0.4480.983-1.472
Standard thresholds
P-value Threshold
0.001 3.24701
0.0005 4.29121
0.0001 6.50751