MotifKLF16.H12CORE.0.SM.B
Gene (human)KLF16
(GeneCards)
Gene synonyms (human)BTEB4, NSLP2
Gene (mouse)Klf16
Gene synonyms (mouse)Bteb4, Drrf
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
B
Motif length11
ConsensusdddGGGCGTRd
GC content70.26%
Information content (bits; total / per base)11.728 / 1.066
Data sourcesHT-SELEX + Methyl-HT-SELEX
Aligned words9252

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 2 (13) 0.648 0.74 0.472 0.566 0.638 0.796 1.631 2.369 6.569 10.071

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Overall, 3 experiments median 0.894 0.83 0.865 0.803 0.815 0.76
best 0.901 0.831 0.872 0.808 0.832 0.773
Methyl HT-SELEX, 1 experiments median 0.901 0.831 0.872 0.808 0.832 0.773
best 0.901 0.831 0.872 0.808 0.832 0.773
Non-Methyl HT-SELEX, 2 experiments median 0.761 0.715 0.715 0.681 0.674 0.648
best 0.894 0.83 0.865 0.803 0.815 0.76
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyThree-zinc finger Kruppel-related {2.3.1} (TFClass)
TF subfamilyKr-like {2.3.1.2} (TFClass)
TFClass IDTFClass: 2.3.1.2.16
HGNCHGNC:16857
MGIMGI:2153049
EntrezGene (human)GeneID:83855
(SSTAR profile)
EntrezGene (mouse)GeneID:118445
(SSTAR profile)
UniProt ID (human)KLF16_HUMAN
UniProt ID (mouse)KLF16_MOUSE
UniProt AC (human)Q9BXK1
(TFClass)
UniProt AC (mouse)P58334
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 2 human, 0 mouse
HT-SELEX 2
Methyl-HT-SELEX 1
PCM
ACGT
012248.251294.253731.251978.25
022236.0522.05177.01317.0
031891.0189.04251.02921.0
041551.07.07555.0139.0
050.04.09245.03.0
060.00.09252.00.0
07122.08660.00.0470.0
082.00.09250.00.0
0999.0134.01120.07899.0
101801.25216.255967.251267.25
112079.51101.53831.52239.5
PFM
ACGT
010.2430.140.4030.214
020.2420.0560.560.142
030.2040.020.4590.316
040.1680.0010.8170.015
050.00.00.9990.0
060.00.01.00.0
070.0130.9360.00.051
080.00.01.00.0
090.0110.0140.1210.854
100.1950.0230.6450.137
110.2250.1190.4140.242
PWM
ACGT
01-0.028-0.580.478-0.156
02-0.034-1.4850.805-0.562
03-0.201-2.4940.6080.233
04-0.399-5.5191.183-2.797
05-6.922-5.9091.385-6.083
06-6.922-6.9221.386-6.922
07-2.9251.319-6.922-1.59
08-6.293-6.9221.385-6.922
09-3.129-2.833-0.7241.227
10-0.25-2.360.947-0.601
11-0.106-0.7410.504-0.032
Standard thresholds
P-value Threshold
0.001 3.96591
0.0005 5.261625
0.0001 7.59174