MotifKLF11.H12INVIVO.0.P.B
Gene (human)KLF11
(GeneCards)
Gene synonyms (human)FKLF, TIEG2
Gene (mouse)Klf11
Gene synonyms (mouse)Tieg2b, Tieg3
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
B
Motif length15
ConsensusvvRGGGGCGGGRCbd
GC content81.55%
Information content (bits; total / per base)16.461 / 1.097
Data sourcesChIP-Seq
Aligned words1000

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 2 (14) 0.79 0.806 0.622 0.651 0.856 0.864 3.245 3.371 49.2 58.658

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Overall, 2 experiments median 0.878 0.812 0.848 0.784 0.796 0.741
best 0.895 0.836 0.863 0.804 0.803 0.754
Methyl HT-SELEX, 1 experiments median 0.86 0.789 0.833 0.764 0.789 0.728
best 0.86 0.789 0.833 0.764 0.789 0.728
Non-Methyl HT-SELEX, 1 experiments median 0.895 0.836 0.863 0.804 0.803 0.754
best 0.895 0.836 0.863 0.804 0.803 0.754

rSNP benchmarking, SNP-SELEX auROC auPRC Pearson r Kendall tau
batch 2 0.684 0.33 0.741 0.483
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyThree-zinc finger Kruppel-related {2.3.1} (TFClass)
TF subfamilyKr-like {2.3.1.2} (TFClass)
TFClass IDTFClass: 2.3.1.2.11
HGNCHGNC:11811
MGIMGI:2653368
EntrezGene (human)GeneID:8462
(SSTAR profile)
EntrezGene (mouse)GeneID:194655
(SSTAR profile)
UniProt ID (human)KLF11_HUMAN
UniProt ID (mouse)KLF11_MOUSE
UniProt AC (human)O14901
(TFClass)
UniProt AC (mouse)Q8K1S5
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 2 human, 0 mouse
HT-SELEX 1
Methyl-HT-SELEX 1
PCM
ACGT
01159.0221.0542.078.0
02404.0201.0290.0105.0
03291.039.0628.042.0
0491.08.0843.058.0
05183.04.0804.09.0
066.01.0988.05.0
073.08.0986.03.0
0810.0947.01.042.0
0913.08.0969.010.0
105.09.0956.030.0
1159.03.0931.07.0
12136.068.0776.020.0
13104.0825.022.049.0
1468.0499.0142.0291.0
15167.0154.0360.0319.0
PFM
ACGT
010.1590.2210.5420.078
020.4040.2010.290.105
030.2910.0390.6280.042
040.0910.0080.8430.058
050.1830.0040.8040.009
060.0060.0010.9880.005
070.0030.0080.9860.003
080.010.9470.0010.042
090.0130.0080.9690.01
100.0050.0090.9560.03
110.0590.0030.9310.007
120.1360.0680.7760.02
130.1040.8250.0220.049
140.0680.4990.1420.291
150.1670.1540.360.319
PWM
ACGT
01-0.449-0.1220.77-1.15
020.477-0.2160.147-0.858
030.151-1.8210.917-1.75
04-0.999-3.2531.211-1.439
05-0.309-3.7831.163-3.156
06-3.484-4.5251.369-3.622
07-3.975-3.2531.367-3.975
08-3.0661.327-4.525-1.75
09-2.839-3.2531.35-3.066
10-3.622-3.1561.336-2.071
11-1.422-3.9751.31-3.362
12-0.603-1.2841.128-2.45
13-0.8671.189-2.362-1.602
14-1.2840.688-0.560.151
15-0.4-0.480.3630.242
Standard thresholds
P-value Threshold
0.001 2.11581
0.0005 3.39691
0.0001 6.08166