MotifJUN.H12CORE.0.P.B
Gene (human)JUN
(GeneCards)
Gene synonyms (human)
Gene (mouse)Jun
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
B
Motif length12
ConsensusbvvTGAGTCAYb
GC content49.79%
Information content (bits; total / per base)14.6 / 1.217
Data sourcesChIP-Seq
Aligned words593

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 64 (409) 0.846 0.979 0.79 0.948 0.814 0.972 3.415 5.224 165.276 542.921
Mouse 29 (173) 0.869 0.942 0.802 0.91 0.851 0.933 3.277 4.468 172.076 367.959

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Non-Methyl HT-SELEX, 1 experiments median 0.657 0.623 0.604 0.581 0.575 0.559
best 0.657 0.623 0.604 0.581 0.575 0.559

rSNP benchmarking, ADASTRA odds-ratio -log-Fisher's P Pearson r Kendall tau
# 17.51 30.211 0.285 0.277

rSNP benchmarking, SNP-SELEX auROC auPRC Pearson r Kendall tau
batch 1 0.895 0.676 0.892 0.619
batch 2 0.634 0.268 0.412 0.511
TF superclassBasic domains {1} (TFClass)
TF classBasic leucine zipper factors (bZIP) {1.1} (TFClass)
TF familyJun-related {1.1.1} (TFClass)
TF subfamilyJun {1.1.1.1} (TFClass)
TFClass IDTFClass: 1.1.1.1.1
HGNCHGNC:6204
MGIMGI:96646
EntrezGene (human)GeneID:3725
(SSTAR profile)
EntrezGene (mouse)GeneID:16476
(SSTAR profile)
UniProt ID (human)JUN_HUMAN
UniProt ID (mouse)JUN_MOUSE
UniProt AC (human)P05412
(TFClass)
UniProt AC (mouse)P05627
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 64 human, 29 mouse
HT-SELEX 1
Methyl-HT-SELEX 0
PCM
ACGT
01102.0123.0258.0110.0
02159.0101.0252.081.0
03243.0102.0207.041.0
040.00.08.0585.0
0512.00.0580.01.0
06559.025.00.09.0
0713.00.0580.00.0
080.00.00.0593.0
092.0591.00.00.0
10593.00.00.00.0
114.0236.051.0302.0
1260.0319.0110.0104.0
PFM
ACGT
010.1720.2070.4350.185
020.2680.170.4250.137
030.410.1720.3490.069
040.00.00.0130.987
050.020.00.9780.002
060.9430.0420.00.015
070.0220.00.9780.0
080.00.00.01.0
090.0030.9970.00.0
101.00.00.00.0
110.0070.3980.0860.509
120.1010.5380.1850.175
PWM
ACGT
01-0.369-0.1850.55-0.295
020.069-0.3790.526-0.596
030.49-0.3690.331-1.258
04-4.542-4.542-2.7481.365
05-2.4-4.5421.356-4.056
061.319-1.729-4.542-2.649
07-2.329-4.5421.356-4.542
08-4.542-4.542-4.5421.378
09-3.731.375-4.542-4.542
101.378-4.542-4.542-4.542
11-3.2880.461-1.0470.706
12-0.8890.761-0.295-0.35
Standard thresholds
P-value Threshold
0.001 2.414885
0.0005 3.87243
0.0001 6.43011