| Motif | HSFY1.H12RSNP.0.S.D |
| Gene (human) | HSFY1 (GeneCards) |
| Gene synonyms (human) | HSFY2, HSF2L, HSFY, HSF2L, HSFY |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | D |
| Motif | HSFY1.H12RSNP.0.S.D |
| Gene (human) | HSFY1 (GeneCards) |
| Gene synonyms (human) | HSFY2, HSF2L, HSFY, HSF2L, HSFY |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | D |
| Motif length | 12 |
| Consensus | ndCGTTCGAAhn |
| GC content | 42.1% |
| Information content (bits; total / per base) | 13.451 / 1.121 |
| Data sources | HT-SELEX |
| Aligned words | 8508 |
| HT-SELEX benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
|---|---|---|---|---|---|---|---|
| Overall, 6 experiments | median | 0.923 | 0.907 | 0.781 | 0.786 | 0.64 | 0.673 |
| best | 0.992 | 0.987 | 0.973 | 0.965 | 0.823 | 0.838 | |
| Methyl HT-SELEX, 2 experiments | median | 0.806 | 0.774 | 0.661 | 0.661 | 0.572 | 0.593 |
| best | 0.86 | 0.835 | 0.682 | 0.693 | 0.573 | 0.607 | |
| Non-Methyl HT-SELEX, 4 experiments | median | 0.989 | 0.983 | 0.91 | 0.905 | 0.749 | 0.77 |
| best | 0.992 | 0.987 | 0.973 | 0.965 | 0.823 | 0.838 | |
| TF superclass | Helix-turn-helix domains {3} (TFClass) |
| TF class | Heat shock factors {3.4} (TFClass) |
| TF family | HSF {3.4.1} (TFClass) |
| TF subfamily | {3.4.1.0} (TFClass) |
| TFClass ID | TFClass: 3.4.1.0.8 |
| HGNC | HGNC:18568 HGNC:23950 |
| MGI | |
| EntrezGene (human) | GeneID:159119 (SSTAR profile) GeneID:86614 (SSTAR profile) |
| EntrezGene (mouse) | |
| UniProt ID (human) | HSFY1_HUMAN |
| UniProt ID (mouse) | |
| UniProt AC (human) | Q96LI6 (TFClass) |
| UniProt AC (mouse) | |
| GRECO-DB-TF | yes |
| ChIP-Seq | 0 human, 0 mouse |
| HT-SELEX | 4 |
| Methyl-HT-SELEX | 2 |
| PCM | HSFY1.H12RSNP.0.S.D.pcm |
| PWM | HSFY1.H12RSNP.0.S.D.pwm |
| PFM | HSFY1.H12RSNP.0.S.D.pfm |
| Alignment | HSFY1.H12RSNP.0.S.D.words.tsv |
| Threshold to P-value map | HSFY1.H12RSNP.0.S.D.thr |
| Motif in other formats | |
| JASPAR format | HSFY1.H12RSNP.0.S.D_jaspar_format.txt |
| MEME format | HSFY1.H12RSNP.0.S.D_meme_format.meme |
| Transfac format | HSFY1.H12RSNP.0.S.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 2821.75 | 1754.75 | 1456.75 | 2474.75 |
| 02 | 3560.5 | 1022.5 | 2556.5 | 1368.5 |
| 03 | 383.0 | 7081.0 | 577.0 | 467.0 |
| 04 | 3264.0 | 11.0 | 5233.0 | 0.0 |
| 05 | 0.0 | 0.0 | 1.0 | 8507.0 |
| 06 | 0.0 | 0.0 | 0.0 | 8508.0 |
| 07 | 0.0 | 8508.0 | 0.0 | 0.0 |
| 08 | 0.0 | 87.0 | 8090.0 | 331.0 |
| 09 | 8448.0 | 1.0 | 15.0 | 44.0 |
| 10 | 7393.0 | 135.0 | 73.0 | 907.0 |
| 11 | 3334.25 | 1332.25 | 904.25 | 2937.25 |
| 12 | 2317.75 | 2452.75 | 1693.75 | 2043.75 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.332 | 0.206 | 0.171 | 0.291 |
| 02 | 0.418 | 0.12 | 0.3 | 0.161 |
| 03 | 0.045 | 0.832 | 0.068 | 0.055 |
| 04 | 0.384 | 0.001 | 0.615 | 0.0 |
| 05 | 0.0 | 0.0 | 0.0 | 1.0 |
| 06 | 0.0 | 0.0 | 0.0 | 1.0 |
| 07 | 0.0 | 1.0 | 0.0 | 0.0 |
| 08 | 0.0 | 0.01 | 0.951 | 0.039 |
| 09 | 0.993 | 0.0 | 0.002 | 0.005 |
| 10 | 0.869 | 0.016 | 0.009 | 0.107 |
| 11 | 0.392 | 0.157 | 0.106 | 0.345 |
| 12 | 0.272 | 0.288 | 0.199 | 0.24 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.282 | -0.192 | -0.378 | 0.151 |
| 02 | 0.515 | -0.731 | 0.184 | -0.44 |
| 03 | -1.71 | 1.202 | -1.302 | -1.512 |
| 04 | 0.428 | -5.079 | 0.9 | -6.847 |
| 05 | -6.847 | -6.847 | -6.481 | 1.385 |
| 06 | -6.847 | -6.847 | -6.847 | 1.385 |
| 07 | -6.847 | 1.385 | -6.847 | -6.847 |
| 08 | -6.847 | -3.172 | 1.335 | -1.855 |
| 09 | 1.378 | -6.481 | -4.815 | -3.829 |
| 10 | 1.245 | -2.742 | -3.343 | -0.851 |
| 11 | 0.449 | -0.467 | -0.854 | 0.322 |
| 12 | 0.086 | 0.142 | -0.227 | -0.04 |
| P-value | Threshold |
|---|---|
| 0.001 | 2.18271 |
| 0.0005 | 3.79261 |
| 0.0001 | 7.126015 |