MotifHSFY1.H12INVIVO.1.S.D
Gene (human)HSFY1
(GeneCards)
Gene synonyms (human)HSFY2, HSF2L, HSFY, HSF2L, HSFY
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype1
Quality
D
Motif length18
ConsensusnSRTTCGAAhSRTTCKWh
GC content44.69%
Information content (bits; total / per base)18.247 / 1.014
Data sourcesHT-SELEX
Aligned words9984

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Overall, 6 experiments median 0.942 0.942 0.773 0.789 0.64 0.679
best 1.0 1.0 0.996 0.996 0.829 0.856
Methyl HT-SELEX, 2 experiments median 0.878 0.882 0.673 0.705 0.574 0.614
best 0.911 0.917 0.68 0.722 0.578 0.62
Non-Methyl HT-SELEX, 4 experiments median 0.986 0.983 0.878 0.879 0.714 0.741
best 1.0 1.0 0.996 0.996 0.829 0.856
TF superclassHelix-turn-helix domains {3} (TFClass)
TF classHeat shock factors {3.4} (TFClass)
TF familyHSF {3.4.1} (TFClass)
TF subfamily {3.4.1.0} (TFClass)
TFClass IDTFClass: 3.4.1.0.8
HGNCHGNC:18568
HGNC:23950
MGI
EntrezGene (human)GeneID:159119
(SSTAR profile)
GeneID:86614
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)HSFY1_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q96LI6
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 0 human, 0 mouse
HT-SELEX 4
Methyl-HT-SELEX 2
PCM
ACGT
012962.252005.253481.251535.25
021006.756818.751450.75707.75
033584.0457.05857.086.0
04154.0225.051.09554.0
0568.015.017.09884.0
0611.09950.018.05.0
0712.0520.08827.0625.0
089477.054.0113.0340.0
097962.0198.062.01762.0
104819.01353.01010.02802.0
11940.06435.01830.0779.0
122996.0349.06245.0394.0
13325.0583.0310.08766.0
14309.0418.0306.08951.0
15161.09148.0482.0193.0
16442.01413.06269.01860.0
177394.5672.5667.51249.5
184142.51912.5796.53132.5
PFM
ACGT
010.2970.2010.3490.154
020.1010.6830.1450.071
030.3590.0460.5870.009
040.0150.0230.0050.957
050.0070.0020.0020.99
060.0010.9970.0020.001
070.0010.0520.8840.063
080.9490.0050.0110.034
090.7970.020.0060.176
100.4830.1360.1010.281
110.0940.6450.1830.078
120.30.0350.6260.039
130.0330.0580.0310.878
140.0310.0420.0310.897
150.0160.9160.0480.019
160.0440.1420.6280.186
170.7410.0670.0670.125
180.4150.1920.080.314
PWM
ACGT
010.171-0.2190.332-0.485
02-0.9071.004-0.542-1.258
030.362-1.6940.852-3.343
04-2.772-2.397-3.8471.342
05-3.571-4.973-4.8631.376
06-5.2351.382-4.813-5.835
07-5.163-1.5651.262-1.382
081.333-3.793-3.076-1.988
091.159-2.524-3.66-0.348
100.657-0.612-0.9030.116
11-0.9750.946-0.31-1.162
120.182-1.9620.917-1.841
13-2.032-1.451-2.0791.256
14-2.083-1.782-2.0921.276
15-2.7281.298-1.641-2.549
16-1.727-0.5680.92-0.294
171.085-1.309-1.316-0.691
180.506-0.266-1.140.227
Standard thresholds
P-value Threshold
0.001 1.20341
0.0005 2.57016
0.0001 5.43211