MotifHSFY1.H12CORE.2.M.B
Gene (human)HSFY1
(GeneCards)
Gene synonyms (human)HSFY2, HSF2L, HSFY, HSF2L, HSFY
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype2
Quality
B
Motif length19
ConsensusnSRTTCbWWhSvTYSbWhn
GC content42.73%
Information content (bits; total / per base)12.586 / 0.662
Data sourcesMethyl-HT-SELEX
Aligned words2467

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Overall, 6 experiments median 0.928 0.929 0.768 0.779 0.646 0.676
best 1.0 1.0 0.992 0.992 0.824 0.849
Methyl HT-SELEX, 2 experiments median 0.873 0.88 0.678 0.707 0.585 0.619
best 0.892 0.901 0.682 0.716 0.587 0.622
Non-Methyl HT-SELEX, 4 experiments median 0.982 0.978 0.869 0.868 0.714 0.737
best 1.0 1.0 0.992 0.992 0.824 0.849
TF superclassHelix-turn-helix domains {3} (TFClass)
TF classHeat shock factors {3.4} (TFClass)
TF familyHSF {3.4.1} (TFClass)
TF subfamily {3.4.1.0} (TFClass)
TFClass IDTFClass: 3.4.1.0.8
HGNCHGNC:18568
HGNC:23950
MGI
EntrezGene (human)GeneID:159119
(SSTAR profile)
GeneID:86614
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)HSFY1_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q96LI6
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 0 human, 0 mouse
HT-SELEX 4
Methyl-HT-SELEX 2
PCM
ACGT
01732.25448.25876.25410.25
02235.01610.0344.0278.0
031210.0105.01118.034.0
0445.0130.010.02282.0
0546.051.066.02304.0
0629.02373.044.021.0
0714.0826.0802.0825.0
081936.0151.084.0296.0
091403.0237.078.0749.0
10952.0414.0372.0729.0
11265.01567.0396.0239.0
121042.0204.01052.0169.0
13159.0211.0100.01997.0
14171.0199.0171.01926.0
15144.01984.0202.0137.0
16185.0814.0575.0893.0
171483.0281.0241.0462.0
18789.5589.5172.5915.5
19610.75610.75517.75727.75
PFM
ACGT
010.2970.1820.3550.166
020.0950.6530.1390.113
030.490.0430.4530.014
040.0180.0530.0040.925
050.0190.0210.0270.934
060.0120.9620.0180.009
070.0060.3350.3250.334
080.7850.0610.0340.12
090.5690.0960.0320.304
100.3860.1680.1510.296
110.1070.6350.1610.097
120.4220.0830.4260.069
130.0640.0860.0410.809
140.0690.0810.0690.781
150.0580.8040.0820.056
160.0750.330.2330.362
170.6010.1140.0980.187
180.320.2390.070.371
190.2480.2480.210.295
PWM
ACGT
010.171-0.3180.35-0.406
02-0.960.958-0.581-0.793
030.672-1.7550.593-2.845
04-2.578-1.545-3.9471.306
05-2.557-2.458-2.2091.316
06-2.9951.345-2.6-3.294
07-3.6580.2910.2620.29
081.142-1.397-1.974-0.731
090.82-0.951-2.0460.194
100.433-0.397-0.5030.167
11-0.8410.931-0.441-0.943
120.523-1.10.533-1.286
13-1.347-1.067-1.8031.173
14-1.275-1.125-1.2751.137
15-1.4441.166-1.11-1.493
16-1.1970.277-0.070.369
170.876-0.782-0.935-0.288
180.246-0.045-1.2660.394
19-0.01-0.01-0.1740.165
Standard thresholds
P-value Threshold
0.001 4.04406
0.0005 5.00101
0.0001 7.00116