MotifHSFY1.H12CORE.0.S.B
Gene (human)HSFY1
(GeneCards)
Gene synonyms (human)HSFY2, HSF2L, HSFY, HSF2L, HSFY
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
B
Motif length12
ConsensusndCGTTCGAAhn
GC content42.1%
Information content (bits; total / per base)13.451 / 1.121
Data sourcesHT-SELEX
Aligned words8508

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Overall, 6 experiments median 0.923 0.907 0.781 0.786 0.64 0.673
best 0.992 0.987 0.973 0.965 0.823 0.838
Methyl HT-SELEX, 2 experiments median 0.806 0.774 0.661 0.661 0.572 0.593
best 0.86 0.835 0.682 0.693 0.573 0.607
Non-Methyl HT-SELEX, 4 experiments median 0.989 0.983 0.91 0.905 0.749 0.77
best 0.992 0.987 0.973 0.965 0.823 0.838
TF superclassHelix-turn-helix domains {3} (TFClass)
TF classHeat shock factors {3.4} (TFClass)
TF familyHSF {3.4.1} (TFClass)
TF subfamily {3.4.1.0} (TFClass)
TFClass IDTFClass: 3.4.1.0.8
HGNCHGNC:18568
HGNC:23950
MGI
EntrezGene (human)GeneID:159119
(SSTAR profile)
GeneID:86614
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)HSFY1_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q96LI6
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 0 human, 0 mouse
HT-SELEX 4
Methyl-HT-SELEX 2
PCM
ACGT
012821.751754.751456.752474.75
023560.51022.52556.51368.5
03383.07081.0577.0467.0
043264.011.05233.00.0
050.00.01.08507.0
060.00.00.08508.0
070.08508.00.00.0
080.087.08090.0331.0
098448.01.015.044.0
107393.0135.073.0907.0
113334.251332.25904.252937.25
122317.752452.751693.752043.75
PFM
ACGT
010.3320.2060.1710.291
020.4180.120.30.161
030.0450.8320.0680.055
040.3840.0010.6150.0
050.00.00.01.0
060.00.00.01.0
070.01.00.00.0
080.00.010.9510.039
090.9930.00.0020.005
100.8690.0160.0090.107
110.3920.1570.1060.345
120.2720.2880.1990.24
PWM
ACGT
010.282-0.192-0.3780.151
020.515-0.7310.184-0.44
03-1.711.202-1.302-1.512
040.428-5.0790.9-6.847
05-6.847-6.847-6.4811.385
06-6.847-6.847-6.8471.385
07-6.8471.385-6.847-6.847
08-6.847-3.1721.335-1.855
091.378-6.481-4.815-3.829
101.245-2.742-3.343-0.851
110.449-0.467-0.8540.322
120.0860.142-0.227-0.04
Standard thresholds
P-value Threshold
0.001 2.18271
0.0005 3.79261
0.0001 7.126015