MotifHSF5.H12CORE.0.M.C
Gene (human)HSF5
(GeneCards)
Gene synonyms (human)HSTF5
Gene (mouse)Hsf5
Gene synonyms (mouse)Gm739
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
C
Motif length12
ConsensusnbWACATTCCRn
GC content41.64%
Information content (bits; total / per base)13.418 / 1.118
Data sourcesMethyl-HT-SELEX
Aligned words8117

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Overall, 2 experiments median 0.97 0.954 0.921 0.906 0.844 0.837
best 0.995 0.992 0.988 0.983 0.956 0.946
Methyl HT-SELEX, 1 experiments median 0.995 0.992 0.988 0.983 0.956 0.946
best 0.995 0.992 0.988 0.983 0.956 0.946
Non-Methyl HT-SELEX, 1 experiments median 0.944 0.916 0.855 0.828 0.732 0.727
best 0.944 0.916 0.855 0.828 0.732 0.727

rSNP benchmarking, SNP-SELEX auROC auPRC Pearson r Kendall tau
batch 2 0.699 0.347 0.695 0.553
TF superclassHelix-turn-helix domains {3} (TFClass)
TF classHeat shock factors {3.4} (TFClass)
TF familyHSF {3.4.1} (TFClass)
TF subfamily {3.4.1.0} (TFClass)
TFClass IDTFClass: 3.4.1.0.5
HGNCHGNC:26862
MGIMGI:2685585
EntrezGene (human)GeneID:124535
(SSTAR profile)
EntrezGene (mouse)GeneID:327992
(SSTAR profile)
UniProt ID (human)HSF5_HUMAN
UniProt ID (mouse)HSF5_MOUSE
UniProt AC (human)Q4G112
(TFClass)
UniProt AC (mouse)Q5ND04
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 0 human, 0 mouse
HT-SELEX 1
Methyl-HT-SELEX 1
PCM
ACGT
011565.252426.251985.252140.25
02805.253260.252218.251833.25
035746.0700.0679.0992.0
046872.0112.01112.021.0
0547.07981.065.024.0
066997.00.01120.00.0
070.00.00.08117.0
080.00.00.08117.0
090.08117.00.00.0
100.04651.02.03464.0
115078.043.02939.057.0
122148.751685.751459.752822.75
PFM
ACGT
010.1930.2990.2450.264
020.0990.4020.2730.226
030.7080.0860.0840.122
040.8470.0140.1370.003
050.0060.9830.0080.003
060.8620.00.1380.0
070.00.00.01.0
080.00.00.01.0
090.01.00.00.0
100.00.5730.00.427
110.6260.0050.3620.007
120.2650.2080.180.348
PWM
ACGT
01-0.2590.178-0.0220.053
02-0.9230.4740.089-0.101
031.04-1.062-1.093-0.715
041.219-2.878-0.601-4.47
05-3.721.369-3.408-4.349
061.237-6.805-0.593-6.805
07-6.805-6.805-6.8051.385
08-6.805-6.805-6.8051.385
09-6.8051.385-6.805-6.805
10-6.8050.829-6.170.534
110.917-3.8040.37-3.535
120.057-0.185-0.3290.33
Standard thresholds
P-value Threshold
0.001 1.997625
0.0005 3.57926
0.0001 7.16984